Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00089 ATGCAAATTCAGAGTCACAGCTACATGATCAAGAACATGCAATGCAACCCTATTGAAGATAAAGCTGCACCTACAAAACCCACTGTTCCTCAGTCACTGGACCCCATCAAACTCTTCACATTGTTCCTCAGTCACTTGTATATGTATCGTTCAAACTTGATAGGGGAAATCCCTGAATCCATTGGAGAAATGGTGGCATTGGAGAACTTGGATATATCACAAAACAGTTTAACTGGATACATTCCCAGTGAATATGTTCAAACAACTAGAGTCAGTGAAAAGACTGATGTTTTTAGCTTTGGGGTTATACTATTGGAATTGACAACTGGTAAAGAAGCCAATTATGGTGATGAGCACTCATCTCTTGCAGAATGGGCTTGGCGCCACATGAATGTAGGAAGCAATATAGAAGAGCTGCTAGATAGTGATTTCATGGAACCAAATTACTTGGATGAAATGATCAGTGTTTTCAAACTTGGGATCATGTGTACTGCAACATTTCCTGCTAGTAGGCCTTCCATGAAGAAGGTTTTACACATATTGCTCTGCTGTGGAGAAGGATTTACATTTGGAGAGAGGAATGTTAGGAGATATGATGATGTTTCCACTTCTTAA 615 0.3967 MQIQSHSYMIKNMQCNPIEDKAAPTKPTVPQSLDPIKLFTLFLSHLYMYRSNLIGEIPESIGEMVALENLDISQNSLTGYIPSEYVQTTRVSEKTDVFSFGVILLELTTGKEANYGDEHSSLAEWAWRHMNVGSNIEELLDSDFMEPNYLDEMISVFKLGIMCTATFPASRPSMKKVLHILLCCGEGFTFGERNVRRYDDVSTS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00089 204 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 79 179 - -
Rops5g00089 204 Pfam Protein tyrosine and serine/threonine kinase 79 180 IPR001245 GO:0004672|GO:0006468
Rops5g00089 204 SUPERFAMILY Protein kinase-like (PK-like) 79 179 IPR011009 -
Rops5g00089 204 SUPERFAMILY L domain-like 43 85 - -
Rops5g00089 204 Gene3D Transferase(Phosphotransferase) domain 1 62 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00089 Rops-Chr5 1434362 1436208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00089 79 181 Receptor kinase-like Gene Family AT5G25930 54.369 6.94e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops5g00089 PK_Tyr_Ser-Thr 7.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00089 - - gmx:100819744 206.453