Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00084 ATGACGAAATTTATGCCATCATGTGTCAACATGCAAATGTTCTCTCTTCTCTCCTTCTTTCTCTTTCTCACCTTTGCAAACTCTGAGTCTCGGTCTCAGTTGTATGATCAAGAACATGCAATCCTATTGAAGATAAAGCAATACCTGCAAAATGCATCATTCCTCAGTCACTGGACCCCATCAAACTCTTCACATTGTTCTTGGCCAGAGATCACTTGCACCAATGATTCTGTCACTGCACTGGCTATGATCAACACCAACATCACTCAAACATTACCGCCTTTCCTATGTGACCTCACAAACCTCACATACGTTGATTTTCAATGGAATTACATTCCTGGGGAGTTCCCAAAATCTCTCTACAACTGCTCCAAGCTTGAGCACCTTGATCTCTCACAGAACTACTTTGTTGGTAAGATTCCTGATGATATTGACCACTTGGCTAGCTTGCGTTTCCTTAGCCTTGGTGGCAACGGCTTTTCTGGTGATATTCCAGTGAGTATTGGGAGGTTGAAGAAGCTAAGAAGTCTTCAACTTTATCAGTGCCTTTTCAATGGTACTTTCCTTGCTGATATTGGCAATTTGTCCAACCTTGAAACATTGTTTATGTTCTCAAACAGCATGCTCCCTCCCACAAAGTTGCCATCAAGCTTGACCAAGTTGACCAAATTGAGGGTCTTTCATATGTTTTACTCCAACTTGGTTGGGGAAATCCCTGAAACCATTGGAGAAATGGTGGCATTGGAGGAGTTGGATTTATCAGGAAATAGTTTAAGTGGACAAATTCCAAAGGGTTTGTTCATGCTGAAAAATCTGAGCATACTTTATCTTTACAATAACAGCCTTTCTGGGGAGATACCAGGAGTGGTTGAAGCATTCAACTTAACAAGCCTTGATCTTTCACAGAATAATCTCACTGGGAAAATACCAGATGATTTGGGAAAGCTCAAAGAGTTAACATACTTTTGTTTGTTTATGAATCAATTATCAGGGGAGGTACCGGAAAGCATTGGTCTTCTGCCAGCTCTGACTGATTTTGTTGTTTTTCTCAACAATTTATCAGGTACTCTTCCTCTAGATTTTGGCAGGTTCTCAAAGCTTGAAACCTTTCAGGTTGCATCTAATAGATTCACAGGAAGGTTGCCTGAAAACTTGTGCTATTATGGAAGGTTAGTTGGTTTAACTGCTTATGATAATAATCTAAGTGGGAAATTTCCAGAATCTCTAGGTAGTTGCAGTAGCCTGCAATATCTGAGAGTTGAGAACAATGAGTTTTCTGGCAACATTCCTAGTGGTCTATGGACATCTATGAATTTGTCAACATTTATGATTAGTGAGAACAAGTTCACTGGTGAGCTTCCTGAAAGATTGTCTTGGAATCTTTCATCCCTGGCCATCAGTTACAATCAATTTTATGGTAAAATTCCAAATGGAGTGTCTTCCTGGAAGAATGTGGTGAAGTTCAATGCCAGTAACAATCTCTTCAATGGAAGTATTCCACTAGAGCTAACTTCTCTTCCCCAGCTAACAACTCTTCTGCTTGATCAGAACCAGCTAACAGGCCCACTTCCATCAGATATAATATCATGGAAGTCCCTAGTAACTCTGAATTTGAGCCAAAACCAACTTTCAGGACAAATCCCCGATGCAATTGGTCAGTTACCTGTCCTTGGTGAGCTTGACCTGTCAGAAAATCAAATCTCTGGCCATGTTCCTTCTCTTCCCAGAGTCACCAATCTCAATCTATCCTCCAATCATTTGACTGGGAGGATTCCAAGTGAATTCGAAAATTCTGCATATGCCAGCAGCTTTTTGAACAATTCTGGTCTCTGTGCTGATACCCTGTTACTAAACCTTACCTTGTGCAATTCTGACCCTAAAAGGGCTAGCAATGACTCATCTGTTTCTCATGTTATGATCATAAGTCTGGTGGTAGCAACCTCCTTTGTGGCTTTCTTATCATCACTCTTGATGATCAGAATTTACAGAAAAAGAAAGCAAGAACTGAAGAAGTCATGGAAGCTCACTTCCTTTCAGAGGCTGAGTTTCACAAAATCAAACATTGTGTCATCAATGACAGAACATAATATTATTGGCAGTGGTGGATATGGTGCAGTGTACCGTGTTGCTATTGAAGGTTTAGGCTATGTTGCAGTGAAAAAGATATTGAGTAGCAGAAAGTTAGAGCAGAGGCTTGTAGATTCATTTTTTGCAGAAGTTGAAATACTGAGCAATATTCGTCATAACAACATTGTAAAGTTGTTGTGCTGTATCTCCAGTGAGGATTCTTTGCTCCTTGTCTATGAGTATCTTGAAAACCATAGCCTTGATAGGTGGCTTAATAAGAAAAGTAAGCCATCAGATGTGTCAGGTTCGGTCCATCATAGCATCATTGATTGGCCAAAGAGATTGCATATAGCCATTGGAGCTGCTCAAGGTTTGTGCTACATGCATCATGATTGCTCACCACCTGTTGTTCATAGAGATGTGAAAACAAGTAACATCCTTTTGGATTCTGAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTGATCAAGCCAGAAGAACTTGCTACCATGTCAGCTGTAGCTGGCACATTTGGCTATATTGCTCCAGAGTATGCTCAAACAACACGAATCAATGAGAAGATAGATGTCTATAGTTTTGGAGTTATCCTATTGGAACTGACAACTGGAAAAGAAGCTAATCATGGAGATGAGTACTCATCTCTTGCAGAATGGGCGTGGCGCCACATTCAGGTGGAAACCAACATAGAAGATGTTCTAGATGAAGAAATTAAGGAAGCTTGTCACTTGGATGAAATGTGCAACATTTTCAAACTTGGGGTCATTTGCACTGCAACACTACCATCAAGTAGACCTTCCATGAAGGAGGTCTTGAAGGTATTGCTGAACTGCAACAATTCACATGCCAATGGAGAGAAGAAAGTTGGTTTCTATGATGCTGTTCCACTTCTCAAGAATTCAAAATGGGAAAAGTAG 3012 0.4041 MTKFMPSCVNMQMFSLLSFFLFLTFANSESRSQLYDQEHAILLKIKQYLQNASFLSHWTPSNSSHCSWPEITCTNDSVTALAMINTNITQTLPPFLCDLTNLTYVDFQWNYIPGEFPKSLYNCSKLEHLDLSQNYFVGKIPDDIDHLASLRFLSLGGNGFSGDIPVSIGRLKKLRSLQLYQCLFNGTFLADIGNLSNLETLFMFSNSMLPPTKLPSSLTKLTKLRVFHMFYSNLVGEIPETIGEMVALEELDLSGNSLSGQIPKGLFMLKNLSILYLYNNSLSGEIPGVVEAFNLTSLDLSQNNLTGKIPDDLGKLKELTYFCLFMNQLSGEVPESIGLLPALTDFVVFLNNLSGTLPLDFGRFSKLETFQVASNRFTGRLPENLCYYGRLVGLTAYDNNLSGKFPESLGSCSSLQYLRVENNEFSGNIPSGLWTSMNLSTFMISENKFTGELPERLSWNLSSLAISYNQFYGKIPNGVSSWKNVVKFNASNNLFNGSIPLELTSLPQLTTLLLDQNQLTGPLPSDIISWKSLVTLNLSQNQLSGQIPDAIGQLPVLGELDLSENQISGHVPSLPRVTNLNLSSNHLTGRIPSEFENSAYASSFLNNSGLCADTLLLNLTLCNSDPKRASNDSSVSHVMIISLVVATSFVAFLSSLLMIRIYRKRKQELKKSWKLTSFQRLSFTKSNIVSSMTEHNIIGSGGYGAVYRVAIEGLGYVAVKKILSSRKLEQRLVDSFFAEVEILSNIRHNNIVKLLCCISSEDSLLLVYEYLENHSLDRWLNKKSKPSDVSGSVHHSIIDWPKRLHIAIGAAQGLCYMHHDCSPPVVHRDVKTSNILLDSEFNAKVADFGLARMLIKPEELATMSAVAGTFGYIAPEYAQTTRINEKIDVYSFGVILLELTTGKEANHGDEYSSLAEWAWRHIQVETNIEDVLDEEIKEACHLDEMCNIFKLGVICTATLPSSRPSMKEVLKVLLNCNNSHANGEKKVGFYDAVPLLKNSKWEK* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00084 1003 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 262 974 - -
Rops5g00084 1003 SMART serkin_6 692 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00084 1003 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Rops5g00084 1003 Gene3D Ribonuclease Inhibitor 346 620 IPR032675 -
Rops5g00084 1003 Pfam Leucine Rich Repeat 248 264 IPR001611 GO:0005515
Rops5g00084 1003 Pfam Leucine Rich Repeat 294 316 IPR001611 GO:0005515
Rops5g00084 1003 SUPERFAMILY L domain-like 42 378 - -
Rops5g00084 1003 Gene3D Transferase(Phosphotransferase) domain 1 771 992 - -
Rops5g00084 1003 Gene3D Ribonuclease Inhibitor 35 186 IPR032675 -
Rops5g00084 1003 Gene3D Ribonuclease Inhibitor 187 291 IPR032675 -
Rops5g00084 1003 SMART LRR_typ_2 574 597 IPR003591 -
Rops5g00084 1003 SMART LRR_typ_2 294 316 IPR003591 -
Rops5g00084 1003 SMART LRR_typ_2 531 554 IPR003591 -
Rops5g00084 1003 SMART LRR_typ_2 245 269 IPR003591 -
Rops5g00084 1003 SMART LRR_typ_2 147 171 IPR003591 -
Rops5g00084 1003 SMART LRR_typ_2 506 530 IPR003591 -
Rops5g00084 1003 FunFam Receptor-like protein kinase HSL1 isoform A 299 622 - -
Rops5g00084 1003 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 191 291 - -
Rops5g00084 1003 Gene3D Ribonuclease Inhibitor 292 345 IPR032675 -
Rops5g00084 1003 SUPERFAMILY RNI-like 294 597 - -
Rops5g00084 1003 FunFam Kinase family with leucine-rich repeat domain-containing protein 674 770 - -
Rops5g00084 1003 ProSiteProfiles Leucine-rich repeat profile. 294 317 IPR001611 GO:0005515
Rops5g00084 1003 Gene3D Phosphorylase Kinase; domain 1 673 770 - -
Rops5g00084 1003 ProSiteProfiles Protein kinase domain profile. 692 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00084 1003 SUPERFAMILY Protein kinase-like (PK-like) 684 973 IPR011009 -
Rops5g00084 1003 Pfam Protein kinase domain 694 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00084 1003 FunFam Receptor-like protein kinase HSL1 isoform A 35 186 - -
Rops5g00084 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Rops5g00084 1003 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Rops5g00084 1003 FunFam Kinase family with leucine-rich repeat domain-containing protein 771 988 - -
Rops5g00084 1003 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00084 Rops-Chr5 1404074 1408006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00084 32 973 Receptor kinase-like Gene Family AT5G25930 52.366 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops5g00084 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00084 - - gmx:100785907 1566.98