Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00077 ATGGGGAACAAAATCGCACGCACGACGCAAGTTTCAGCGTCGGAGTATTATCTTCACGAGCTTCCATCGACGTATAATTTGGTTCTGAAGGAGGTTCTAGGACGTGGTCGTTTCTTCAAATCGATTCAGTGTAAGCACGACGAGGGTTTGGTACTCGTTAAGGTTTATTTCAAGCGTGGCGATTTTCTAGATCTCTCTGATTACGAGCGTCGTCTCTCTCAAATCAAGGAAATTTTCAGTGCCATTGATCATCCTCATGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCTTACCTTTTGAGGCAATATTTCTTCCATAATTTGCATGATCGATTAAGCACTAGGCCTTTTCTTAGTTTCGTGGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCATTAAAACAGAGCCATGAGAAGGGGGTATGTCATGGTGATATCAAATGTGAGAATGTGCTGATTACGTCCTCTAATTGGGTTTACCTTGCTGACTTTGCATCTTTCAAACCCACTTACATACCATATGATGACCCGTCAGATTTCTCTTTCTTCTTTGACACTGGTGGTAGAAGACTCTGTTATCTAGCTCCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATGCCCCCTTAAAGCCATCTATGGATATATTTGCTGTTGGGTGTGTAATTGCTGAACTTTTCCTTGAGGGGCAGCCGCTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGACAATATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGTAAGATGATTCAGCACATGATCCAGTTAGAACCGGAGTCTCGATTTTCTGCTGAAAGATATCTAAAGGAATATGCTGGAGTTGTATTTCCCACCTATTTTTCACCATTTTTGCATGATTTTTACCGGTGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTACTATGCCAGGGTGCTTTCCACGAGATACTTAAACAAATGATGAACAAGCAGTCATCTGATGATGCAGGTGTTACTTCTGGGGAACTTTTGGAAGAGATGGTTGCTAAAGAAAGTGTGAGTTTCATGAAGGAATCACTGATGAAAAGAGAGGATATAGGCAAAGGCTTAGTTCAGGATCACTATGAACTTCTTGGTGATATCAATAGCCTACTGAGGGATGCTAAAAAAAGCAATAATCCATCTGGTCCCCGGCATGTAACAGGAAATGTACACAATTCTACCTTTCCTGAAAATCTAAAAAATTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGATCATCCCTTTTTGAAAATTATTACTATGAAAGATTTAAACTCATTGATGTCTGAGTACGATAGTCAGTCAGATACATTTGGAACGCCTTTTCTACCATTACCAAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAATTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTGCAATGCTTTCTGATCCAGCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCTTAGTGAGAGATTTTCCTCCCAGTGATGCAAAGATATTTCCCGAGTATATTCTTCCTATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTAACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTCCTCGATGAATTGAGTTCACCACAAAAGCCATTGGCATCATCCACTCAGACCGCTGGAAAAACGAAGCAGATAAATAGTGATGTCCAACTTCTGCAGCTGAGGAAATCTATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCACTTCTTCAGGACATTGGTAAACTGTGCTACTTCTTTGGTATGAGACAGAGTAATGACTCTCTCTTACCAATCCTTCCTGCTTTCTTGAATGATCGGGATGAGCAATTAAGGACAGTATTCTACGAAAAGATTGTTTATGTCTGTTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATTTATTACCTTACATTGAGCAAGCTTTAAGTGACACGACGGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGACTATTTTGTGCAGAAGTGGGTTCTTCCGGAAGAGGATATTGCTTCAAATGATAGAGCGTGCCTTTCCTTTATTGTGTTATCCTAGCAAATGGGTACGGAGATCAGTTGTATCTTTCATTGCTGCTAGCAGTGAGAGCTTGGGTGCAGTAGATTCTTATGTTTTCCTTGCTCCTGTTATACGCCCTTTCCTCCGTAGACAACCTGTGTCTCTTGCTTCAGAAAAAGCTGTTTTGTCATGTTTAAAACCTCCTGTCTCTAGACAGGTTTTCTATGAAGTCTTGGAGAACTCCAGGAGTTCAGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAATCTAAACTATGGGAAATGGATTTACTAAAAAAAGGAATCGATGAGTTGGACTCGTTAAAGAACTGGACTGACAAGCAACAAGGTCCCGGGGTTCAACAAGCTGCTGGCACTGCCTTCCAACAGCCAGGGATAACTGACTTTGACAAAGCTGAGGCAAAATTGAGAGATATGGGGGCCTTTATGCATAACGATAGCAATATGATGGCAAATCGTGATCCCCAATGCTTGGACAAGTTACAGTTTTCAGGATTCATGTCACCAACTTTTAGTGGTGTAAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCGTTGTACTCCTTCAGCATGGACAGGCGAGGAACGGGAGTACCTCCTGCAGCATCTGATTCTCCACTACAAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAGTCCACTTAGTAAGTCCTTTAATATGGCTAGTTCAGTTCCAGCACCAAAGCTTTTTTCAGGTTCTTTTAGCATCAGCAATGGTTCTAAACAGTTCCACCGAGTGGTACACGAACCAGATTCCAGGGAAAATGAGACAGCATATGTTAATAGCGCTTTTCAAGATGTGGGATTATCTTCTAATATTAAAGGTAGCTCAATTTCACTGGAAGATGCAACTGCCCAAACTGATGTATCAGGATTTCCATCTTTTGCTAGAACATCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTGTTGGTTGCACACCTTCAGGAGCACCGTTCAGCTGTTAGTGATATAGCAATTTCTTCTGATCAAAGCTTCTTTGTCAGTGCATCTGATGACTCTACAGTCAAGATTTGGGATTCCAGAAAGCTGGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCGTGCATTATGTATGGCAATGCTTCCAGGTTCTGCACAAGTAATAGTTGGGGCATCTGATGGATTTATACATATGTTTTCTGTGGATCATATCTCTAGAGGTCTAGGTAATGTTGTTGAGAAGTATTCTGGTATTGCTGATGTCACAAAGAAGGATATCAAGGAAGGTGCCATACTCAGCCTTTTAAATTGCCCCGTGGATAATTATACCATTATGTATAGCACCCAGAACTGTGGCATTCATCTGTGGGATACTAGGTCCAATTCCAATACCTGGACCCTAAAAGCTACCCCTGAGGAGGGCTATGCTGCATCTCTGGCATCAGGGCCTTGTGGTAATTGGTTTGTATCAGGGTCATCCCGGGGTGTTATTACACTTTGGGATCTGAGGTTTCTTATACCTGTGAACTCTTGGAAATATTCTCATGCATGCCCTATAGAAAAGATGTGTCTCTTTCTTCCTCCTCCAAATGCTTCTCTGTCTTCAACTGCTAGGCCCCTTGTTTATGTGGCTGCTGGTTCCAATGAAGTTTCTCTTTGGAATGCAGAAAATGCTAGCTGCCACCAGGTGCTGAGGATGGCCAATTATGACAGTGATGCAGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTCAAGTAAGCCAACTTCTCAGTCAGATCCAAGACGAAATGTTAATCGCAAGTATGGAGTTGATGAGCTAAATGAACCTCCTCCTCGTCTTCCTGGCATTCGTTCATTTCTTCCCTTGCCAGGGGGTGATTTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTACAGTCCTGAAAGAAGTTACTGCATTTGTGGACCAAACTTAAAAGGAGTGGGAAATGATGATTTTTATGAAACAAAATCTAGTTTCGGAGTGCAAGTTGTACAGGAGACAAAAAGACGTCCTCTTACAACCAAGCTGACAGCAAAGGCAATTCTTGCAGCTGCTGCCACTGATTCTGCTGGTTGCCATCGTGATTCTATTGTTTCTCTGGCTTCTGTTAAGTTAAACCAGAGACTCTTACTGTCAAGTGGTAGAGATGGGGCCATCAAGGTCTGGAAGTAA 4614 0.4231 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFLDLSDYERRLSQIKEIFSAIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLALKQSHEKGVCHGDIKCENVLITSSNWVYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAERYLKEYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQGAFHEILKQMMNKQSSDDAGVTSGELLEEMVAKESVSFMKESLMKREDIGKGLVQDHYELLGDINSLLRDAKKSNNPSGPRHVTGNVHNSTFPENLKNLQSPGELLQTISNAFRGNDHPFLKIITMKDLNSLMSEYDSQSDTFGTPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSSPQKPLASSTQTAGKTKQINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGMRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTEAVIVRALECLTILCRSGFFRKRILLQMIERAFPLLCYPSKWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKAVLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIDELDSLKNWTDKQQGPGVQQAAGTAFQQPGITDFDKAEAKLRDMGAFMHNDSNMMANRDPQCLDKLQFSGFMSPTFSGVNSLTYEKPSEGIPLYSFSMDRRGTGVPPAASDSPLQMNSLGVSSSAMPWVSPLSKSFNMASSVPAPKLFSGSFSISNGSKQFHRVVHEPDSRENETAYVNSAFQDVGLSSNIKGSSISLEDATAQTDVSGFPSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAISSDQSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRALCMAMLPGSAQVIVGASDGFIHMFSVDHISRGLGNVVEKYSGIADVTKKDIKEGAILSLLNCPVDNYTIMYSTQNCGIHLWDTRSNSNTWTLKATPEEGYAASLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWKYSHACPIEKMCLFLPPPNASLSSTARPLVYVAAGSNEVSLWNAENASCHQVLRMANYDSDAEMSDLPWALARPSSKPTSQSDPRRNVNRKYGVDELNEPPPRLPGIRSFLPLPGGDLLTGGTDLKIRRWDHYSPERSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLTTKLTAKAILAAAATDSAGCHRDSIVSLASVKLNQRLLLSSGRDGAIKVWK* 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00077 1537 MobiDBLite consensus disorder prediction 1383 1411 - -
Rops5g00077 1537 Gene3D - 1226 1537 IPR015943 GO:0005515
Rops5g00077 1537 SUPERFAMILY Protein kinase-like (PK-like) 26 315 IPR011009 -
Rops5g00077 1537 Gene3D - 1045 1222 IPR015943 GO:0005515
Rops5g00077 1537 CDD STKc_Vps15 16 303 - -
Rops5g00077 1537 Pfam HEAT repeat 530 558 IPR000357 GO:0005515
Rops5g00077 1537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Rops5g00077 1537 ProSiteProfiles HEAT repeat profile. 530 562 IPR021133 -
Rops5g00077 1537 FunFam Protein kinase family protein / WD-40 repeat family protein 24 347 - -
Rops5g00077 1537 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1504 1537 - -
Rops5g00077 1537 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00077 1537 SUPERFAMILY ARM repeat 421 825 IPR016024 -
Rops5g00077 1537 Gene3D Transferase(Phosphotransferase) domain 1 21 370 - -
Rops5g00077 1537 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1537 IPR045162 GO:0004674|GO:0016236|GO:0045324
Rops5g00077 1537 SUPERFAMILY WD40 repeat-like 1112 1537 IPR036322 GO:0005515
Rops5g00077 1537 MobiDBLite consensus disorder prediction 399 421 - -
Rops5g00077 1537 SMART WD40_4 1114 1153 IPR001680 GO:0005515
Rops5g00077 1537 SMART WD40_4 1497 1537 IPR001680 GO:0005515
Rops5g00077 1537 SMART WD40_4 1164 1201 IPR001680 GO:0005515
Rops5g00077 1537 SMART WD40_4 1409 1443 IPR001680 GO:0005515
Rops5g00077 1537 SMART WD40_4 1261 1302 IPR001680 GO:0005515
Rops5g00077 1537 SMART serkin_6 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00077 1537 ProSiteProfiles Trp-Asp (WD) repeats profile. 1504 1537 IPR001680 GO:0005515
Rops5g00077 1537 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1121 1153 - -
Rops5g00077 1537 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 476 615 - -
Rops5g00077 1537 ProSiteProfiles HEAT repeat profile. 698 736 IPR021133 -
Rops5g00077 1537 ProSiteProfiles Trp-Asp (WD) repeats profile. 1121 1153 IPR001680 GO:0005515
Rops5g00077 1537 FunFam Protein kinase family protein / WD-40 repeat family protein 626 836 - -
Rops5g00077 1537 Pfam WD domain, G-beta repeat 1117 1153 IPR001680 GO:0005515
Rops5g00077 1537 Gene3D - 669 838 IPR011989 -
Rops5g00077 1537 Gene3D - 476 618 IPR011989 -
Rops5g00077 1537 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00077 Rops-Chr5 1306689 1314333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00077 29 293 MAP Kinase Gene Family AT2G01450 25.817 4.68e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Rops5g00077 Pkinase 1.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00077 K08333 - gmx:100818467 2815.41