Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00052 ATGGTGGAGAAGGGCAAGGGTAGGAAGGAGGAGGTGGTTACCAGAGAGTACACCATCAACCTCCACAAGCGCCTCCATGGCTGCACATTTAAGAAGAAGGCTCCAAAAGCAATTAAGGAGATTAGGAAGTTTGCCCAGAAAGCAATGGGGACTAATGATGTGAGGGTGGATGTGAAGCTGAACAAGTATGTGTGGAGCCAGGGAATCCGAAGTGTACCTAGGAGGATTAGGGTACGCATTGCACGCAAGAGGAATGATGATGAAGATGCCAAGGAAGAGCTATACTCTCTTGTTACAGTTGTTGAAATTCCTAAGGAAGAACTCAAAGGGTTGAACACCAAAGTCATTGATGATGAGGATTAA 363 0.4601 MVEKGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLNTKVIDDED* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00052 120 Gene3D - 9 120 IPR023621 -
Rops5g00052 120 FunFam 60S ribosomal protein L31 6 120 - -
Rops5g00052 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Rops5g00052 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Rops5g00052 120 PANTHER 60S RIBOSOMAL PROTEIN L31 2 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Rops5g00052 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Rops5g00052 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Rops5g00052 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00052 Rops-Chr5 1040038 1041202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00052 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 81.513 2.44e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00052 K02910 - gmx:100810835 219.164