Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00050 ATGGAAAACATTAAAGATCCATCAATTTACCGCAATCCAATCATATTGCAGAGTGAAGACTTAAGGAAGTATATACTGGAGACTACTGTCTACCCTCGAGAACCTGAGCCTCTCAAAGAGTTGAGGGATGCCAATAAGAATCATCCTTGGGGTTTCATCGCTACTTCACCTGATGCGGGTCAGCTAATGACCATACTTTTGAAGCTGTTGAATCCCAAGAAGACAATTGAAGTGGGAGTGTTTACTGGGTACTCACTTCTCCTCACTGCACTCAACATCCCTGATGATGGAAAGATTACAGCCATAGATGTTGATAGGAAAGCTTATGAGGTTGGATTACCAGTCATCAAAAAGGCTGGAGTAGAGCACAAGATTGATTTCATAGAGTCACCAGCTCTACCAATTTTGGATAAACTGCTAGAAGATCCGGCAAATGAAGGAACTTTTGACTTTGCCTTCATTGATGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGCTTATAAAACTAGTCAAGATTGGTGGATTACTTGTATACGACAACACTTTATGGGGTGGACGTGTTGCCTGGCCTGAAGAGGAAGTTCCACCACACAGCAAACCCGGGAGGCAAGGAGCAATTGAATTTAACAACACAGTCACAAAGGATTCTCGTGTTGAATTTTCTCTTACTTCCATAGGGGATGGCCTCAGTATTTGCAGGCGTGTTGCCTGA 717 0.4296 MENIKDPSIYRNPIILQSEDLRKYILETTVYPREPEPLKELRDANKNHPWGFIATSPDAGQLMTILLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDVDRKAYEVGLPVIKKAGVEHKIDFIESPALPILDKLLEDPANEGTFDFAFIDADKENYVNYHERLIKLVKIGGLLVYDNTLWGGRVAWPEEEVPPHSKPGRQGAIEFNNTVTKDSRVEFSLTSIGDGLSICRRVA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00050 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Rops5g00050 238 PANTHER O-METHYLTRANSFERASE-RELATED 13 237 - -
Rops5g00050 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Rops5g00050 238 CDD AdoMet_MTases 76 180 - -
Rops5g00050 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Rops5g00050 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00050 Rops-Chr5 1034013 1035511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00050 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.229 1.56e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00050 K00588 - gmx:100800911 436.032