Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00045 ATGTTGAAGGACTCTGTAAGAACTAAGACATATCAAAATGTTATTTATCAGAATAAGTTTTTATTCAAGAATAAAATAGTTCTTGATGTGGGTGCTGGAACTGGGATTTTGTCATTATTTTGTGCCAAAGCAGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCAAAGGAGATAGTTGAAGCTAATGGTTGCTCTAATGTTATAACGGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTCCTAAAGTTGATATAATCATTTCAGAATGGATGGGGTATTTCTTGTTGTTTGAGAATATGTTGAATTCTGTGCTCTATGCACGTGACAAATGGCTTGCGGATGATGGTGTTGTGCTACCAGATAAAGCGTCCCTCTTTCTCACTGCCATAGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATTAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCTACAAACTGTCAGCCACTCAAGACAATGGACATTTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGCACCTTTTAAGCTTGTAGCTGTACGTGACGATTATATCCATGCTCTTGTTGCATATTTTGATGTATCATTTACGAAGTGTCATAAATTGATGGGCTTCTCTACAGGGCCAAGATCACGAGCTACACATTGGAAACAGACAGTCCTATATCTGGAAGATATCTTGACAATTTGTGAGGGGGAGGCAATTGTAGGGAGCATGACTGTGGCTCCAAATACGAAAAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGCAGGCGATGCAATGTTTCAAGGGTTCAGCATTACAAGATGCGTTGA 921 0.3985 MLKDSVRTKTYQNVIYQNKFLFKNKIVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGCSNVITVLKGKIEEIELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGVVLPDKASLFLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQPLKTMDISKMAPGDASFTAPFKLVAVRDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDILTICEGEAIVGSMTVAPNTKNPRDVDIMLKYSLNGRRCNVSRVQHYKMR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00045 306 FunFam probable protein arginine N-methyltransferase 1 1 128 - -
Rops5g00045 306 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 293 IPR025799 GO:0016274|GO:0018216
Rops5g00045 306 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 287 IPR025799 GO:0016274|GO:0018216
Rops5g00045 306 FunFam Blast:Protein arginine N-methyltransferase 1 130 306 - -
Rops5g00045 306 CDD AdoMet_MTases 27 127 - -
Rops5g00045 306 Gene3D Vaccinia Virus protein VP39 1 128 IPR029063 -
Rops5g00045 306 Pfam Ribosomal protein L11 methyltransferase (PrmA) 21 97 - -
Rops5g00045 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 305 IPR029063 -
Rops5g00045 306 Gene3D - 130 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00045 Rops-Chr5 954352 956885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00045 1 269 C2H2 Transcription Factor Family AT3G12270 38.144 1.15e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00045 K11434 - gmx:100781777 592.423