Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00038 ATGGCGGCGGTTGTCATCACCAGGTTGAAGAGGGAGCAATGCAATCGCACAAAACACGATTCTAACTTCTCACGTTGGAAGATTCTGATTGGCCCTTCTGATTGGGAAGACTATTCCAAAGGAAAGGAAGGATGCTCAAGATACAGGATTCATAACCTCCCACAAAAATCAGGTCCAGGAGTGTATGAGCTTGGAATAGCTGTGTTGGGTAGTGGTTTGGGGCGTGAAATTTACAAGCTTGCCCCTAACTCTCACCGCATAGTTGTGGTTTATCTTGGACAAGCTGACGATGTGAGAGCAAGACTCCAGTGTTATGGCAGAACTGGAGCTCATTTGGACAATAGTTGCTCAGATGATGCTTCTCTCCAAAAGGGGAGGCCATTGTTTCAAGAGATATTTTCACAAGGCTTCCCAATTGTTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCCCTGAGAACAGAAGCTCAGCTGCTAAGTACCTTTGATTATGCATGGAACACAAGCAATAATGGTATCCGGAGGCCTAATGATATTCTTCAAACGCTCACCAAAATTGTTTCAGGCACCAGAACATTTTCAGATGTGGCCAAAGTGCTTCTACCTTTCACTCAGAGGCGAGTGGGGATCCGAATCAAATCAAGCAAGTTGCCTCTGACAGATGACAAATCAGATGAAGCAGACAATGGCAGCTATAATTTCCTATCTCGCGTATTCAACTTCAACAGATCTCGTCCTAGGATAGTTCAGGATTTCAATGGTGTCATTCAGGAGAAAGCTAAATTTTGTGGAGTAAAGTTGGCTGATGGTTCTATTTGTAGAAGGCCACCAGCTGAGAAAAGAAAGGGGTGTCCTGAACACAAAGGAATGAGAACAAATGTATCCACTTCTAAAGCAATCAGAGCACCCAAGTCAGAGGGTATTGTGGTACTAGAACCTGATGTGTATTGTCAAACAAAGGGCAATGACTACAGATACCAAAATGTTGGCCATGAAGTAGAAGACCCTCCACAAACAGTGGTTGAGAGTCCTGTTGAAGAAGGTATCACCAATACCAATATATGTGGAATCATCTTGAACGATGGCTCCACTTGTAGAAGACAACCGGTTAAAGGAAGAAAAAGGTGTCATGAGCACAAATGGATGAGAATTCGTAAATCTATTCATATAAATCAAAATGTTGGCCATGAAGTAGAAGACCCTCCACAAACAGTGGTTGAGAGTATCACCAATACCAATATATGTGGAATCATCTTGAATGATGGCTCCAGTTGTAGAAGACAACCAGTTAAAGGAAGAAAAAGGTGTCATGAGCACAAATGGATGAGAATTCGTAAATCTATTCATATAAATCAAAATGTTGGCCATGAAGTAGAAGACCCTCCACAAACAGTGGTTGAGAGTCTTGTTGAAGAGGGTATCACCAATACCAATACCAATATATGTGGAATCATCTTGAACGATGGCTCCACTTGTAGAAGACAACCAGTTAAAGGAAGAAAAAGGTGTCATGAGCACAAAGGAATGAGAATTCGTAAATCTATTCATTTAAATCAGAAATAA 1566 0.417 MAAVVITRLKREQCNRTKHDSNFSRWKILIGPSDWEDYSKGKEGCSRYRIHNLPQKSGPGVYELGIAVLGSGLGREIYKLAPNSHRIVVVYLGQADDVRARLQCYGRTGAHLDNSCSDDASLQKGRPLFQEIFSQGFPIVYRWAPMQNKEDALRTEAQLLSTFDYAWNTSNNGIRRPNDILQTLTKIVSGTRTFSDVAKVLLPFTQRRVGIRIKSSKLPLTDDKSDEADNGSYNFLSRVFNFNRSRPRIVQDFNGVIQEKAKFCGVKLADGSICRRPPAEKRKGCPEHKGMRTNVSTSKAIRAPKSEGIVVLEPDVYCQTKGNDYRYQNVGHEVEDPPQTVVESPVEEGITNTNICGIILNDGSTCRRQPVKGRKRCHEHKWMRIRKSIHINQNVGHEVEDPPQTVVESITNTNICGIILNDGSSCRRQPVKGRKRCHEHKWMRIRKSIHINQNVGHEVEDPPQTVVESLVEEGITNTNTNICGIILNDGSTCRRQPVKGRKRCHEHKGMRIRKSIHLNQK* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00038 521 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 463 515 IPR038909 GO:0003677|GO:0006355
Rops5g00038 521 Pfam GIY-YIG domain-containing protein 23 181 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00038 415 518 HRT Transcription Factor Family AT5G56780 41.346 5.43e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Rops5g00038 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00038 - - lang:109350609 616.305