Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00022 ATGCCCTCATCTGCATCAGAATTCATTGCCCCGGATACAACCATGAAGATGTTTGGTTGTTCTGGCAAAAAGTTGCACCATCTTTGTAGTGCTTCATGTAAAAAAATTGCTCGTCTAAGCAAATCAGTGTTTTTCTTAGCAGCATGCTTTTGTCGCTTCATCCTCCGCAGGGTAAACCCACTATGGGTTCAAATTGTCTATTTTGTGTCTCTTTCGTTTTTGGGGTTTGGGGTTCTGAAAGCTCTCAAGCCTAGAACAGGTTCTTTTAGTCCTAAAAACTTAGATTTGTTCTTCACCTCTGTGTCAGCCACCACAGTTTCAAGCATGTCCACGGTTGAAATGGAGGTTTTTTCTAACCCTCAGCTCATCATCATGACCATCTTCATGTTCATTGGTGGTGAGGTCTTTACCTCCATGGTAGGACTCCATTTCATTAGGTCCAGGCTCAAAACCGAACTAGATAAAATCGCTTCTTCTCATGCCCGTCTCAGTACTCCAAATCTCCTCATTGTTGATCAAATTGAAATTGAGCTAGGAATGGTCACAGATTCTAACCAAGACAGTTCCACACCTAAACCCACTGAGGAAAAAAACGATGAATATCACGAGTCTTTGTGTAGCACAAATAAAAACTTGAGGTATTCATCTTTGAAATATTTGGGTTTTGTAGTGCTAGCTTACCTGGTAGTTTCCCACGTGATAGGTGTCTTTGCTGTGTCTCTTTACCTGATTGTTATTCCCAGTGCTAAAGAGGTGCTAAAGAACAAAGGGCTCAAAATGTTCACATTCTCTGTTTTCACTGTAGTTTCAACTTTTGCAAGCTGTGGTTTTGTTCCAACAAACGAAAACATGGTTGTTTTTAGAAAGAATTCAGGTCTCCTTCTCATGCTTATTCCTCATGTCCTTCTTGGGAACACATTGTTCCCTCCTTGTTTGCGGTTTTTGATATGGGTTTTGGGGAAATTTTATAAGAAAAAAGAGTGTAAGTACCTTCTGAAAAATTCACAAGAGGTGGGGTACAAGCACCTGCTTCCAGGACAGCACACTGTTCTTCTGGTAGCTACTGTTTTTGGTTTTATTCTGGTTCAAGTTATACTGTTTTGCGTAATGGATTGGAATGCAGAAGCTTTGAAAGGGTTGAATGCATATGAGAAATTCATTGGCGTATTGTTTCAAAGCGTGAATTCCAGACACACAGGAGAAACCATTGTGGACCTCTCAATTCTATCTCAGGCCATCTTGGTATTATTTGTGGTGATGATTTCTTATTATTTCTTCAAGCTCGCTTCTCTTCTCAAAGAATGTAATGCACTCAACACTTCTTCTGAAGACTCTTATGCTGAAGCTTTTGATCTTTTTCAGGATGATCTCACTCCTCTAACCGTGGTCATGCCTACTTTGACAACCAACCCAGTGAAGGGTCCAAGGGTTGAACAAACTACCCATGTCAACAAGCAAGAAGGCCCAAGAGACAAGACCCATTTCGACCAATCTTGCACAAAACCTGTTCAAGATGCAAGGGAAGTCAAAACGGAAGAAGATAAAGAGGAAGAAGAAAATCAAGTCTCTCGAGACAAAGACCAAGAAATGATCAAAAGGTAA 1602 0.4064 MPSSASEFIAPDTTMKMFGCSGKKLHHLCSASCKKIARLSKSVFFLAACFCRFILRRVNPLWVQIVYFVSLSFLGFGVLKALKPRTGSFSPKNLDLFFTSVSATTVSSMSTVEMEVFSNPQLIIMTIFMFIGGEVFTSMVGLHFIRSRLKTELDKIASSHARLSTPNLLIVDQIEIELGMVTDSNQDSSTPKPTEEKNDEYHESLCSTNKNLRYSSLKYLGFVVLAYLVVSHVIGVFAVSLYLIVIPSAKEVLKNKGLKMFTFSVFTVVSTFASCGFVPTNENMVVFRKNSGLLLMLIPHVLLGNTLFPPCLRFLIWVLGKFYKKKECKYLLKNSQEVGYKHLLPGQHTVLLVATVFGFILVQVILFCVMDWNAEALKGLNAYEKFIGVLFQSVNSRHTGETIVDLSILSQAILVLFVVMISYYFFKLASLLKECNALNTSSEDSYAEAFDLFQDDLTPLTVVMPTLTTNPVKGPRVEQTTHVNKQEGPRDKTHFDQSCTKPVQDAREVKTEEDKEEEENQVSRDKDQEMIKR* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00022 533 Pfam Cation transport protein 211 420 IPR003445 GO:0006812|GO:0008324|GO:0055085
Rops5g00022 533 Coils Coil 508 528 - -
Rops5g00022 533 MobiDBLite consensus disorder prediction 468 533 - -
Rops5g00022 533 MobiDBLite consensus disorder prediction 483 533 - -
Rops5g00022 533 MobiDBLite consensus disorder prediction 468 482 - -
Rops5g00022 533 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 40 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00022 Rops-Chr5 771144 780597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00022 80 421 Inorganic Solute Cotransporters AT4G10310 49.563 3.22e-97 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00022 K24976 - vvi:100242150 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00022 5 771144 780597 Rops5g00022 5 771144 780597 ECH