Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00021 ATGAATAACTTTGCCTACTTTGGTAGAAAGCTAGAACATCTTTGTAGTTTTTTCTCCAACAACTTCAAATCCCATGGATCATTGGCTCCTGCTCTCTCCTTCCAATTCAACTCCTTCTTCATCCAACTTTGTTATTTCATCATCCTTTCTCTGTTTGGTTTCTTGGGTCTCAAGGTCTCAAAACCAAGGACCCCTGTTAGGCCTAGTAACTTTGATCTGTTTTACACCTCTGTTTCTGCTTCCACAGTTTCAAGCATGACAGCTGTAGAAATGGAGGTTTTCTCCAATTCCCAACTCATTCTCATGACCTTTCTTATGTTTGTAGGTGGGGAAGTTTTTACTTCCTTGCTTGAACTTGTATTTGCTAGGTTCCACCTCACCCCAATTCAGAGGGCCAAAAACAGATGCCGTAATACTCTTTCACTGAAAAATGAGTCCCCAATTAAGGCCAATCAAGTTGAGCTTGGTTTAGTTTCTATTCCTCTATCAGAAAACCACCAACACAGTGATAGTATTATTAATGTTCCAAACGGCACGGTAAAAAGAGATAGACTTAAGTATAACTCAATTAGGTATTTGAGTCATGTGGTTTTAGGTTACCTTGTGGTGGTCCATTTTGTTGGTTCTAGTTTGGTCTCTTTGTACATTACCTTTATACCGAGTGCGAGACGAGTACTGAAAAACAAAGGCATCAAAATACAAACATTTTCTATCTTTACCATAGTATCCACTTTTGCCAGTTGTGGTTTTGTCCCCACCAATGAGAACATGATAGTTTTCAAGAAGAATTCAGGTCTCCTCCTCCTTATCCTCCCACATATCTTGCTAGGTAACACGCTGTACCCACCATGTTTGAGGCTCATCATAATGGCTCTGAAAAAAGTTACCGGAAGAGAAGAATGCTCATACTTGCTGAAGAATTTCAAAGAAATGGGTTATGGCCATTTGCTCCCTGCTCTTCATTGTTGGCTCTTGATTGTCACTGTCTTTGGGTTCATTCTGATACAGTTTATAATGTTCTGCTCCATGGAGTGGAACTCCAAAATTATGGAGGGTCTAAATCTGTATCAGAAACTGGTTGCATCTTTGTTTCAAGTTACAAACGCCAGACATACTGGTGAATCCGTTTTTGATCTCTCCACCATCTCTTCAGCCATATTGGTGCTCTTCGTTGTCATGATGTACCTGCCACCGTACACTACATTTTTACCTACAAGGGACAACAAAAATGATGCCAAGAGAGACGAAAAAAGCCTAGTGGAGTGTCTTGTATTCTCTCAACTCTCTTATTTGGTTATTTACATTATTCTGATTTGCATCACTGAGAGCCAAAGCTTAAAAGAGGATCCCCTCAACTTTAATGTGTTGAACATTACCCTAGAAGTCATCAGTGCGTATGGGAATGTGGGGTTCTCAACGGGATATAGCTGCGCAAGGCAATTGAAACCCGATGCTATGTGCAAAGATTCATGGGTTGCATTTTCGGGTAGGTGGAGTACCAAAGGCAAGTTCATCCTTATTATGGTGATGTTCTTTGGGAGGCTCAAGAAATTTAATATGAAAGGTGGCAAAGCCTGGCACCTGTCCTAG 1590 0.4069 MNNFAYFGRKLEHLCSFFSNNFKSHGSLAPALSFQFNSFFIQLCYFIILSLFGFLGLKVSKPRTPVRPSNFDLFYTSVSASTVSSMTAVEMEVFSNSQLILMTFLMFVGGEVFTSLLELVFARFHLTPIQRAKNRCRNTLSLKNESPIKANQVELGLVSIPLSENHQHSDSIINVPNGTVKRDRLKYNSIRYLSHVVLGYLVVVHFVGSSLVSLYITFIPSARRVLKNKGIKIQTFSIFTIVSTFASCGFVPTNENMIVFKKNSGLLLLILPHILLGNTLYPPCLRLIIMALKKVTGREECSYLLKNFKEMGYGHLLPALHCWLLIVTVFGFILIQFIMFCSMEWNSKIMEGLNLYQKLVASLFQVTNARHTGESVFDLSTISSAILVLFVVMMYLPPYTTFLPTRDNKNDAKRDEKSLVECLVFSQLSYLVIYIILICITESQSLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCARQLKPDAMCKDSWVAFSGRWSTKGKFILIMVMFFGRLKKFNMKGGKAWHLS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00021 529 Pfam Cation transport protein 425 516 IPR003445 GO:0006812|GO:0008324|GO:0055085
Rops5g00021 529 Pfam Cation transport protein 182 396 IPR003445 GO:0006812|GO:0008324|GO:0055085
Rops5g00021 529 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 34 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00021 Rops-Chr5 756174 760159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00021 58 528 Inorganic Solute Cotransporters AT4G10310 52.183 3.96e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00021 K24976 - gmx:100797835 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00021 5 756174 760159 Rops5g00021 5 756174 760159 ECH