Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02428 ATGAAACTACAGGCACATATTCCGGGGCAAATGTCAGGACAGGTACCTAATCAAGCAGGGTCTCAGTTGCCTGGACTGGCCCAATTGAATGGGAATGCCCTCCCTCCACAGATGCCACCTTTAGGGGGTGTACCACGATCAACTATTAATATGGACCCTGAATTTCTTAGAGCACGCTCATTTATTCAAGAGAAGATCTATGATATGTTATTGCAACGACATCAGCAGCAGCCAGTTCCAGAAGTACTGAGAAGGAAGCTTAAGGATCTTGCAAAACGCCTGGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGACTACATGAACTTGGATACACTAGAGAGCCGTTTATCTAATTTCCTAAGACGAGTATCTATGAATAATCACAACCAACAGTATCAGCAGCTTGTTAGCTCTTCTCCAATTGGTACTATGATACCAACCCCTGGTATGTCGCACGTTCCAAATTCAAGCATGGTGGTGGCATCTTCTATGGATACCTCAATGATTTCTGCCAGCGGGTGTAATAGCAGCATAGTATCGACATCTTTCAATAGTGTTAATATGTTACCAGCTGGTGGCATGCTTGGCAGTTCCTTAAATAGATCTGATGGTTTGTCTAATGGATATCAGCAGTCTTCTACCGGATTTTCTGTTGGCTCAGGGGGGAACATGTCATCAATGGGGGTGCAGAGAATTGCAAGCCAGATGATTCCCACTCCTGGATTTGCTGTCAGCAGTCATCACTCACACATGAATATTGATTCTTCTACTAATGGCAGTGCCTTTTCCAGTGTAGAGTCTGCTATGGTATCACAGTCACAGCTGCAGCAGCAGAAGCAGCATGTTGGTGGCCAAAGTCATGTGTTACAGAACGTTGGCAGCCAAGTGAGCAGTGGAATGAGATCTGGTTTACTACAAAAACCATTTGCAAACTCAAATGGTGCTATAAATAGTGGGCTAGGCTTGATTGGAAACAACATACAACTTGCAAATGAACCTGGCACTTCCGATGGCTATGCTTCAACTTATGCAAATTCCCCTAAACAGTTACAGCAGCACTTTGATCAAAATCAGAAACCAGTAGTGCAGGGTGATGGATATGGATTGAATAATGTTGATACTTTTGCTTCTGGGAACTTTTATGCATCTGCTACATCCACTGGGTCTATGATGAACACACAGAACACGAATTCAGTAAAATTGCCATCAATACCCAAAACTAGCTCATTTATAAGTGGCCACTCAAATTTGCATAGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATTAATCAGTTGGATAAGTTGAATTTTCAGCCTTCATTGACTTCAAGAGATGCCCATCTGCATTCTCAACAGCAGTATCAGCAAAGGCCCCAACAATCTCAACAGCCAGAGCAGTATGCACAGCAACAATTTCAATTGAAGCTACAAAGTCAACAGCCTCAGCATTTGGTCAATGGTGATGCTTTCAGTCAGTCTCATCTGTCTTCTAATCTAGAAAACCAAGTGAAATCTGAGCCTGGAATTGAGCAACATAAAGAAGTGCTCAATTCTCATGTTTCTGAACAGTTCCACATGTCTGAGATGCAGAGTCAGTTCCAGCAGAACTCATCTGAAGATTGCTCTAGGAGTGCTCAATATCTTTCATTTCCATCTGGTCAGCATGACTTCACCTCATCAACACCTCAAAATTCGCAACAAATGTTGCATCCACACCAATTGGTTTCAGAATCTCAAAATAATTTTAGCTGTCTTACCGTTGGGCCACAAGCCAAATCGGCAGTTCTAAACCAATGGCCTCAGTCACAAGATAGTAACCACATGCCTGACAATATTTCACATGAAAAGCATCTCCACATGGATTTTCATCAAAGGATATCAGGGCAGGATGAAGCTCAATGCAATAATTTATCATCAGATGTATCTATTGTTGGTCAAGCTGTTGCATCTAGAGGCTCAACTGAGATGCTAGACTCAGGCAGTGCTATCAAAAAGGCACACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCTCGACGATGTTCTGCTCCTGAAGGAAGATGCCAAGAACGCTTTTGTTCTATTGCGCAAAAGTTATGTAAGCACATAGATGGATGCACCCTGCGTCACTGTCCATATCCTCGTTGTCATCATACCAGGGTATTGCTTCATCATTTCATAAATTGCAAGGATCCATGTTGCCCTGTTTGTGTCTTTGTAAGAAATTATCGACGTGCATTTCAACTCAAGCCTCAGGTTCGGCCAGAACCAGAATCAAGTTTGCCAAATGGATCATGTAAATCTTACAATATTATCGCCACATCACCTAGATTAATCTCAAAGCCTCCAGTAATTGTTGAAACTTCTGAAGACTTGCACCCATCTCTAAAACGCATAAAGATTGAGCATTGCTCCCAGCCTATTAATCCTGAAAATGACAATTCAGCTTCATCCGTTTCTGCAAATTGTGAATCTCTTGTTTCCAGGGATGCAAAGTCCCAAGCCTATCCCAATGCTGAGAAGTCTATCTCTATTAAATCTGAGCTTACAGAAGTTAAGGCTGAAGTCCCTGCACATTTGGTACATGGAAAGCTTAGTGAGATGGGGATGGATAACAATGATGCAGATGATAAAATGCCTGATGGTGAACCTGTCAAATATGATGAACCTGCTAATTTTGCTAGGCCGGAAAGTATAAAAACTGAGAAAGAAAGTGGACAAGATAAGCAAGAAAATGTGATGCAGCCATCTGAACATGCAGCTGGAACCAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCATTAACTGAATTGTTTACTCCAGAGCAAGTCAGGGAACATATCAGTGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAATCAAGCAATGGAGCACAGTGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCACCACCTATTTATTGCACAACTTGTGGGGTTCGCATTAAACGAAATAATATGTATTATACCACGGGTACTGGTGATACACGGCACTATTTTTGTATTCCCTGCTATAATGATGCTCGTACAGAGAACATCATTGTTGACGGGACTCCCATTGCCAAGTCAAGAATGGAAAAGAAGAAAAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAGCATCAAATTTGTGCCTTATTTAATGGTAGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAATTGCTATATCGAAGAGGTAAAAAGAGGAGAGCGCAAGCCCTTACCCCAGAGTGCTGTTCTTGGAGCTAAGGATTTGCCGAGAACTATTCTTAGTGACCATATAGAACAACGATTGTTTAGACGGCTAAAGCAAGAAAAACAAGAGAGGGCAAGGCTTCAAGGAAAAAGTCATGATGAGGTGCCTGGAGCTGAAGCTCTTGTCATAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAGGTGAAACAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACTGAATTCCCATATAAATCCAAGGTAATTTTACTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGATCCGAATGTCAATTTCCCAATCACCGCCGGGTGTATCTTTCATATTTGGACTCTGTGAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATACTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCTTGTCCTCCGCTAAAGGGTGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCCGATAAGCTTCGTGAATGGTATCTATCCATGTTAAGAAAAGCTGCCAAGGAGAATATTGTGGTCGATATCACCAACTTATATGATCATTTCTTCATATCAACTGGGGAATGTAGGGCTAAGGTTACAGCTGCAAGACTCCCTTATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGACGAAAACAAAATAAAAAAGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTAAAAGCGTCTGGTCAGTCAGATCTTTCAGGAAATGCCTCAAAAGATCTGCTCCTCATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCTTGCACCCACTGTTGTATTTTAATGGTGTCTGGCAATCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTACGAAGCAGAGGTAAAGCGTGAAGAGAGAGAGAGACATCCTATTAATCAGAGGGAGAAACATACTCTTTATCCAGTTGAAATTACGGAGGTGCAATCTGATACAAAGGACAAAGATGATATTCTAGAGAGTGAATTTTTTGACACTAGACAGGCATTTTTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTGCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTGACAACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCAAAAAGATGGAGGTGTTGATCATCCTCATAAGTTGACAAATCATCCGTCGATGGTGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTATTGCAGCTAAGGAAAATGCTTGATCTCCTTGTGCACGCATCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTGAAGGGGCTTTTCCGTCATGGGATGCATTGCAAAACACGTGCTTCCGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCACGTACCACGATGCAGAGATTTGAAAGAACATTTAAGGAGGTTGCAGCAACAGTCTGATTCAAGGCGAAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAATGCTGGATGA 5190 0.4195 MKLQAHIPGQMSGQVPNQAGSQLPGLAQLNGNALPPQMPPLGGVPRSTINMDPEFLRARSFIQEKIYDMLLQRHQQQPVPEVLRRKLKDLAKRLEEGMLKAALSKEDYMNLDTLESRLSNFLRRVSMNNHNQQYQQLVSSSPIGTMIPTPGMSHVPNSSMVVASSMDTSMISASGCNSSIVSTSFNSVNMLPAGGMLGSSLNRSDGLSNGYQQSSTGFSVGSGGNMSSMGVQRIASQMIPTPGFAVSSHHSHMNIDSSTNGSAFSSVESAMVSQSQLQQQKQHVGGQSHVLQNVGSQVSSGMRSGLLQKPFANSNGAINSGLGLIGNNIQLANEPGTSDGYASTYANSPKQLQQHFDQNQKPVVQGDGYGLNNVDTFASGNFYASATSTGSMMNTQNTNSVKLPSIPKTSSFISGHSNLHSMQQAAHIKSQAINQLDKLNFQPSLTSRDAHLHSQQQYQQRPQQSQQPEQYAQQQFQLKLQSQQPQHLVNGDAFSQSHLSSNLENQVKSEPGIEQHKEVLNSHVSEQFHMSEMQSQFQQNSSEDCSRSAQYLSFPSGQHDFTSSTPQNSQQMLHPHQLVSESQNNFSCLTVGPQAKSAVLNQWPQSQDSNHMPDNISHEKHLHMDFHQRISGQDEAQCNNLSSDVSIVGQAVASRGSTEMLDSGSAIKKAHRNQQRWLLFLLHARRCSAPEGRCQERFCSIAQKLCKHIDGCTLRHCPYPRCHHTRVLLHHFINCKDPCCPVCVFVRNYRRAFQLKPQVRPEPESSLPNGSCKSYNIIATSPRLISKPPVIVETSEDLHPSLKRIKIEHCSQPINPENDNSASSVSANCESLVSRDAKSQAYPNAEKSISIKSELTEVKAEVPAHLVHGKLSEMGMDNNDADDKMPDGEPVKYDEPANFARPESIKTEKESGQDKQENVMQPSEHAAGTKSGKPKIKGVSLTELFTPEQVREHISGLRQWVGQSKSKAEKNQAMEHSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGTGDTRHYFCIPCYNDARTENIIVDGTPIAKSRMEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVKRGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQEKQERARLQGKSHDEVPGAEALVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNHRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVDITNLYDHFFISTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACTHCCILMVSGNRWVCNQCKNFQICDKCYEAEVKREERERHPINQREKHTLYPVEITEVQSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGVDHPHKLTNHPSMVDRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02428 1729 ProSiteProfiles Zinc finger TAZ-type profile. 1611 1694 IPR000197 -
Rops4g02428 1729 Gene3D - 1550 1604 IPR043145 -
Rops4g02428 1729 FunFam Histone acetyltransferase HAC1 1550 1601 - -
Rops4g02428 1729 Pfam PHD-finger 1054 1096 IPR019787 -
Rops4g02428 1729 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1113 1549 IPR031162 GO:0004402
Rops4g02428 1729 Pfam Zinc finger, ZZ type 1553 1595 IPR000433 GO:0008270
Rops4g02428 1729 SUPERFAMILY FYVE/PHD zinc finger 1057 1098 IPR011011 -
Rops4g02428 1729 Gene3D - 1427 1486 IPR043145 -
Rops4g02428 1729 SUPERFAMILY RING/U-box 1411 1483 - -
Rops4g02428 1729 Pfam Histone acetylation protein 1152 1372 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops4g02428 1729 Coils Coil 1129 1149 - -
Rops4g02428 1729 MobiDBLite consensus disorder prediction 875 915 - -
Rops4g02428 1729 CDD PHD_HAC_like 1023 1095 - -
Rops4g02428 1729 ProSiteProfiles Zinc finger ZZ-type profile. 1431 1494 IPR000433 GO:0008270
Rops4g02428 1729 ProSiteProfiles Zinc finger TAZ-type profile. 665 746 IPR000197 -
Rops4g02428 1729 MobiDBLite consensus disorder prediction 242 287 - -
Rops4g02428 1729 SMART TAZ_2 668 746 IPR000197 -
Rops4g02428 1729 SMART TAZ_2 1614 1692 IPR000197 -
Rops4g02428 1729 SUPERFAMILY TAZ domain 670 750 IPR035898 -
Rops4g02428 1729 MobiDBLite consensus disorder prediction 450 473 - -
Rops4g02428 1729 Pfam TAZ zinc finger 675 743 IPR000197 -
Rops4g02428 1729 Pfam TAZ zinc finger 1621 1691 IPR000197 -
Rops4g02428 1729 SMART KAT11_2 1146 1443 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops4g02428 1729 SMART zz_5 1550 1596 IPR000433 GO:0008270
Rops4g02428 1729 SMART zz_5 1430 1474 IPR000433 GO:0008270
Rops4g02428 1729 FunFam Histone acetyltransferase of the CBP family 12 1427 1486 - -
Rops4g02428 1729 SUPERFAMILY RING/U-box 1532 1600 - -
Rops4g02428 1729 Gene3D TAZ domain 663 751 IPR035898 -
Rops4g02428 1729 ProSiteProfiles Zinc finger ZZ-type profile. 1551 1604 IPR000433 GO:0008270
Rops4g02428 1729 Gene3D TAZ domain 1608 1725 IPR035898 -
Rops4g02428 1729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1048 1096 IPR013083 -
Rops4g02428 1729 PANTHER CBP/P300-RELATED 86 475 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops4g02428 1729 ProSitePatterns Zinc finger PHD-type signature. 1024 1095 IPR019786 -
Rops4g02428 1729 MobiDBLite consensus disorder prediction 873 935 - -
Rops4g02428 1729 SUPERFAMILY TAZ domain 1613 1696 IPR035898 -
Rops4g02428 1729 ProSitePatterns Zinc finger ZZ-type signature. 1556 1583 IPR000433 GO:0008270
Rops4g02428 1729 FunFam Histone acetyltransferase HAC1-like protein 1608 1725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02428 Rops-Chr4 51512854 51531962 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Rops4g02428 HAT_KAT11 5.5e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02428 K04498 - gmx:100809207 3084.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02428 4 51512854 51531962 Rops4g02428 4 51512854 51531962 ECH