Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02416 ATGATGGATGATGACATGGAGACCGGTTCTTTGGGGCCTTACCAGGACAGGCCACGAACTTTCCCTAACATGCGTAGTAAAGCTTACACCCCTCTGATATTTCGTATTCTAATGGGTATAAATGTTCGTGTCTTGTTCATTCTTTTGTTCCTGGGGTTCGGAGCTATCTTTTACCTGGGAGCAAGGACATCTCCAATTATTGTGTTCGTCATCTCTGTTTGCATTCTCAGCTTCCTTGTGGCAATATATCTTACCAAGTGGGTGCTCGCAAAAGATGAGGGCCCCCCTGAAATGGTTCAGATATCTGATGCTATACGAGATGGAGCTGAAGGATTTTTCAGGACCCAGTATGGGAGTATATCCAAGATGGCGATGTTGCTTGCTGTTGTCATTCTTTGCATATATTTGTTTCGCAGTACAACTCCTCAACAGGAATCTTCTGGCCTGGGAAGGTCAACATCTGCATACATTACTGTAGCTGCTTTCCTTTTAGGTTCCCTTTGTTCAGGCATTGCTGGATACGTGGGGATGTGGGTGTCAGTTCGTGCCAACGTCAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGATAGCTACTCGTGCAGGTGGTCTATCTGCTATCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTACTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTGTTTGCTCAGTTGGGTGGTGGAATATACACTAAAGCCGCTGATGTTGGGGCAGACCTCGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCCAGGAATCCTGCTGTTATTGCTGATCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGTATCGCAGCTGAAATAGTCAGTGCCATGATACTTGGGGGAACAATGGCAAAACGCTGTAAAATCGAAGATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCAGTTGGAATATTTTCTATTAGGGGTACACGTGAATCTGGAGTAATGGTTCCTACGGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTCTAGCTGTTCTGACATTTGGTCTGTCTACCCGGTGGTTACTTTATACTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTATGTGGATTGATCGGCATTATCACAGCTTATGTTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCACATTAGCCCTTTCTTGCTCTACAGGCCATGGGACTAACATAATTGCCGGAGTCAGTTTGGGCCTGGAATCTACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTGTCTCAGCTTTCTGGCTGGGCCACACCTCAGGACTATTGGATGAAACGGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTGGCTACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATAGCTGATAATGCTGGAGGAATTGTAGAGATGAGTCAGCAGCCCGAAAGTGTCCGAGAGATAACTGATGTCCTTGATGCTGTGGGAAATACAACCAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTCTGTTTAGTGCTTACATGGATGAGGTTTCTGCATTTGCTCATGAACCTTTTACACAGGTTGATATTGCAATTCCAGAAGTTTTCATTGGTGGGTTACTGGGTGCCATGCTTATATTTCTCTTTAGTGCTTGGGCTTGTTCTGCTGTTGGCCGAACTGCACAAGAAGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCCATTGTAGCATCTGCATCATTGAGAGAGATGATAAAACCTGGTGCTCTGGCAATCATTTCACCTATTGTAGTTGGTTTTCTGTTCCGAATTTTGGGCTACTATACAGGGCAACCCTTACTTGGGGCTAAAGTTGTGGCTGCTTTTCTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCAATAACAGGAGATACAGTGGGAGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACAATTACTCTGGTAATGGCTCCAGTGTTCCTGTGA 2406 0.4485 MMDDDMETGSLGPYQDRPRTFPNMRSKAYTPLIFRILMGINVRVLFILLFLGFGAIFYLGARTSPIIVFVISVCILSFLVAIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFFRTQYGSISKMAMLLAVVILCIYLFRSTTPQQESSGLGRSTSAYITVAAFLLGSLCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIVSAMILGGTMAKRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMVPTEDPMTILQKGYSVTIVLAVLTFGLSTRWLLYTEQAPSAWFNFALCGLIGIITAYVFVWITKYYTDYKHEPVRTLALSCSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLLDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFTQVDIAIPEVFIGGLLGAMLIFLFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRILGYYTGQPLLGAKVVAAFLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPVFL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02416 801 PIRSF H+-PPtase 60 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops4g02416 801 Pfam Inorganic H+ pyrophosphatase 75 796 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops4g02416 801 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 64 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops4g02416 801 NCBIfam V-type H(+)-translocating pyrophosphatase 69 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops4g02416 801 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 91 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02416 Rops-Chr4 51227714 51243260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02416 1 801 Primary Pumps ATPases AT1G16780 87.640 0.0 1451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02416 K23025 - gmx:100787805 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02416 4 51227714 51243260 Rops4g02416 4 51227714 51243260 ECH