Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02413 ATGTATGTATATAAATTGGCTGTGAATAGAAAAATGAAAGTTACAAGGCTCCCAAGCTCTCTCAAGTTGGGACTCAATTATCCTGCATTTCCCAAAAAGATGGCACATAAGCCATTATTGATGGACGGAGAATTGTCCGATGGCAGCGGCAGGAGCAAGGTTCCCAAGGGATTCCTGGCCGTTTATGTGGGGCCGGGGTCTCGAAGGTTCGTGATTCCGGTAAGCTTCTTGGACATGCCAGACTTCAGGGATTTGATGGAGAGGGTCGCTGAAGAGTTTGGTTGCGACCATCACGGTGCTCTCCAGATCCCCTGTGATGAAGTGTATTTTGAGCATATTTTGACGACGTGTTGCACAAGACAACGCATCACATCTTCTAAGAACCACAAGAAGATTAAACTTGATATACATAGGGGGTACTCACAAGTTAATCAGTCCAACCTGATATATATTAAAGCAAGTTGGATTCTAAATAATATTGCAAAGTTGAGACATCATTAA 501 0.4331 MYVYKLAVNRKMKVTRLPSSLKLGLNYPAFPKKMAHKPLLMDGELSDGSGRSKVPKGFLAVYVGPGSRRFVIPVSFLDMPDFRDLMERVAEEFGCDHHGALQIPCDEVYFEHILTTCCTRQRITSSKNHKKIKLDIHRGYSQVNQSNLIYIKASWILNNIAKLRHH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02413 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 113 IPR003676 GO:0009733
Rops4g02413 166 Pfam Auxin responsive protein 49 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02413 Rops-Chr4 51193470 51194668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02413 54 114 Calmodulin-binding Proteins AT3G43120 55.738 1.39e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02413 K14488 - vun:114165672 127.102