Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02412 ATGGATTCTAAAAAGTCTAACAAGATCAGAGAGATTGTTAGGCTCCAACAAATCCTCAAGAAGTGGAAGAAGGTTGCAAATGCTTCCAAAAGCAGCTCTGCCTCTTCCTCATTTTCTGCTAGCACCACCAGCAGTGGCAGTGGCAGTAAAGGCATCAAGTTTTTAAAGCGAACTCTGTCATTCACAGATGTCTCTTCTTCAAATGACATCGTTCCAAAAGGGTATCTTGCTGTTTGTGTCGGGAAGGAGTTCAAGAGGTTCATTATCCCAACAGAGTACTTGAGACACCAAGCATTTGAGATGTTGTTGCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTTAAATTTCCATGCGAAGTATCAGTGTTTGAGAAGATATTGAAGGTGGTGGAACATAAAAAAGAAGCCTTGCATGAGTTTGGGTTAAGTGGAGGAGAGAAGGACAGGATTAGTTGTTATGCATCAGATTGTGAAGTTACTCCCACTCATCATGCTCAAGTGTGTAGATGA 522 0.4215 MDSKKSNKIREIVRLQQILKKWKKVANASKSSSASSSFSASTTSSGSGSKGIKFLKRTLSFTDVSSSNDIVPKGYLAVCVGKEFKRFIIPTEYLRHQAFEMLLQEAEEEFGFQQEGVLKFPCEVSVFEKILKVVEHKKEALHEFGLSGGEKDRISCYASDCEVTPTHHAQVCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02412 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 130 IPR003676 GO:0009733
Rops4g02412 173 MobiDBLite consensus disorder prediction 26 50 - -
Rops4g02412 173 Pfam Auxin responsive protein 20 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02412 Rops-Chr4 51192465 51192986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02412 1 173 Calmodulin-binding Proteins AT2G24400 57.838 2.92e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02412 K14488 - cave:132188722 228.409