Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02395 ATGACGAAGGATAAGGAGAAGGAAAAAGAAAAAGAAAAAGAAAAGGAAACGGAGAAGAAGAAGTATCCCATCGGAGCCGAGCATTACCTTCTCTACGAGGAGATTGGACACGGCGTCAGTGCTTCTGTCCACCGCGCTCTCTGTCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATTGCGATCTGAATAATGTTTCTCGTGAAGCACAGACGATGATCCTGGTGGACCACCCTAACGTGCTGAAATCGCACTGCTCCTTCGTGAGCGACCATAATCTGTGGGTGGTGATGCCATTCATGGCTGGCGGTTCGTGCCTTCACATATTGAAAGCGGCACACCCTGATGTTTTTGAGGAGGTGGTGATTGCCACCGTACTGAGGGAGGTGTTGAAGGGTTTAGAGTACCTTCATCATCATGGCCACATCCACAGAGATGTCAAGGCTGGCAACGTTCTCATCGATTCACGCGGTGCCGTCAAGCTTGGCGATTTTGGCGTCTCTGCTTGCCTCTTTGATTCTGGTGACAGACAACGCTCCAGGAACACCTTCGTCGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATAACTTCAAAGCTGACATCTGGTCATTTGGTATAACCGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTTTCCACCGCTCAAGGTACTGCTTATGACTCTGCAAAATGCACCCCCCGGCCTTGACTACGAAAGGGATAAGAAGTTTTCTAAGTCGTTTAAGCAGATGACTGCTAGTTGCTTAGTCAAAGATCCTACAAAACGACCCTCTGCAAGCAAGTTGTTAAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAATGATTACATTGCACGAACTCTTTTGGAGGGGCTGCCTGCTTTAGGTGACCGCATGGAGGCCCTCAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGCAAATGCCTGCTGGGCAGATGGAGGAATTATCACAGAGTGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTCGACGATGTGAAGGCACAGGCTTCCTTGATCCACGATCTTGATGATGCTATAGCTGATATCAATCATGTGGGAAGTTCATGTTCTTTATCTACACTTGATGCGCAAGATAAGCAAAGTCATAACCCTTCTCAAACTGCTGATATGGAAGAAAATAATGAAATGCAAAATCATTCAGCTTCTGTTCCAGTTGTTGATTTCGCAGTAAATGAGGCCAAGACAAGGTTGGAAAAAATTGATGATGACTCTAGCATCGCCAGTTCAAGCCAAGAACCACAAACTTCTGCTTCCTGTCTTGATGATCAGGTGGACCATAATTTGGGTGAAAAACCTGAGATGGAAAATGGTGGAAGACCCGTGGAGAGCGTGGCTACCCATTCTTATCATAGAAGAGGATGTTCATCCAGCATCTTACCTGAAGTTACTCTTCCACCTATTCGAGGAGAAAGTGCAACTTCAGTTCCACAGACGGGAGAGGATGTGCTTACTGAGCTTCCTTCTAGAGTCTCAAAATCGTCAGCTAATTCCGATGACCCCGATGACAAAGCAAAGGTACCGGTTGTTCAACAGAGAGGACGTTTTAAGGTTACATCTGAGAACGTTGACCCAGAAAAGGTGGCCCCTTCTCCTGTACTGCAAAAGAGTCACAGCATGCAGGTTGGTGGTTTTGAGGTTATCAGCCAGCATAATGCTACTCCTCTACATTCACCTTTACCATTATTACCAGCACCTGATGCTTCGTCATCAAATCCTTCTGGCGGTTCTCTGTTCCCAGTGCTGCACTCTCTGTTGCAGACAAATATTCTTCAAAGGGAGAGTATTCTAAGTTTAATGAAGCAAATTTCTGCGAGTGACTCTACAGCTGATGGCGCAAGTAACCCAGCACAGGTAGCCGCAATTGAGAAATCTGTGCTTGAAGCAGCTCACGATAGGGAGAAGGAGTTACTTCATGAGATAACTGATTTGCAGTGGAGGCTGATATGTACCCAGGAAGAGCTTCAAAAATTTAAAACAGAAAACGCCCAGGTGTGA 2091 0.4648 MTKDKEKEKEKEKEKETEKKKYPIGAEHYLLYEEIGHGVSASVHRALCLPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAAHPDVFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNVLIDSRGAVKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPLKVLLMTLQNAPPGLDYERDKKFSKSFKQMTASCLVKDPTKRPSASKLLKHSFFKQARSNDYIARTLLEGLPALGDRMEALKRKEEDMLAQKQMPAGQMEELSQSEYKRGISGWNFNLDDVKAQASLIHDLDDAIADINHVGSSCSLSTLDAQDKQSHNPSQTADMEENNEMQNHSASVPVVDFAVNEAKTRLEKIDDDSSIASSSQEPQTSASCLDDQVDHNLGEKPEMENGGRPVESVATHSYHRRGCSSSILPEVTLPPIRGESATSVPQTGEDVLTELPSRVSKSSANSDDPDDKAKVPVVQQRGRFKVTSENVDPEKVAPSPVLQKSHSMQVGGFEVISQHNATPLHSPLPLLPAPDASSSNPSGGSLFPVLHSLLQTNILQRESILSLMKQISASDSTADGASNPAQVAAIEKSVLEAAHDREKELLHEITDLQWRLICTQEELQKFKTENAQV* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02395 696 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 18 691 IPR047173 GO:0043539
Rops4g02395 696 SUPERFAMILY Protein kinase-like (PK-like) 27 291 IPR011009 -
Rops4g02395 696 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Rops4g02395 696 MobiDBLite consensus disorder prediction 431 538 - -
Rops4g02395 696 MobiDBLite consensus disorder prediction 438 454 - -
Rops4g02395 696 Gene3D Phosphorylase Kinase; domain 1 17 106 - -
Rops4g02395 696 SMART serkin_6 29 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02395 696 FunFam serine/threonine-protein kinase BLUS1 isoform X1 110 343 - -
Rops4g02395 696 ProSiteProfiles Protein kinase domain profile. 29 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02395 696 MobiDBLite consensus disorder prediction 385 413 - -
Rops4g02395 696 CDD STKc_OSR1_SPAK 27 290 - -
Rops4g02395 696 FunFam Serine/threonine-protein kinase BLUS1 18 106 - -
Rops4g02395 696 MobiDBLite consensus disorder prediction 385 414 - -
Rops4g02395 696 Gene3D Transferase(Phosphotransferase) domain 1 110 343 - -
Rops4g02395 696 Pfam Protein kinase domain 32 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02395 Rops-Chr4 51038658 51048509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02395 18 678 MAP Kinase Kinase Kinase Kinase AT1G79640 61.988 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Rops4g02395 Pkinase 1.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02395 K08835 - gmx:100780339 1115.52