Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02391 ATGAGAGATGAGATGAGGCCGATTCAACTGCCACCGCCAACCGCCGCAGGATCAGGTTCAAACAACAGGGACCGTCCACAGAGGCGGCGTAGAGACCTAACCTTGCCGCTACCGCAGCGCGAGAATAACTTGGCGGTGCCGCTTCCCCTGCCACCGTCCAGCGCGGGGAGCAGCGGCAGCGGAGGAGGAGGAGGAGGGACACAGCAGCTGATCCCGTTCTCGGAGCTGGAGAGGCTGAATCGCATCGGGAGCGGAAGCGGCGGAACGGTGTACAAGGTGGTCCACAAAGCCACCCGTCGCGTCTACGCACTCAAGGTGATCTACGGACATCACGAGGAGTCGGTGCGGCTTCAGATCCACCGAGAAATCCAGATCTTGAGGGACGTGGACGATGCGAACGTGGTGAAGTGCCACGACATGTACGATCACAACGCAGAAATCCAGGTGCTGCTGGAGTTCATGGACGGTGGTTCTCTGGAAGGAAAACACATCCCTCAGGAGCAGCAGCTGGCGGACGTGGCTCGGCAGATCCTGCGGGGGCTGGCTTACCTGCACCGGCGGCACATCGTTCACAGGGACATAAAGCCGTCGAACCTGCTGATAAACTCGCGGAAGCAGGTGAAGATAGCGGACTTCGGGGTGGGTCGGATCCTGAACCAAACGATGGATCCGTGCAATTCGTCGGTGGGTACGATCGCGTACATGAGCCCAGAGAGGATAAACACGGACATCAATGACGGGCAATACAACGCGTACGCTGGGGATATATGGAGCCTTGGGGTGAGCATATTGGAGTTTTACATGGGGAGGTTTCCCTTTGCGGTTGGTAGGCAGGGTGATTGGGCCAGCTTGATGTGTGCTATTTGTATGTCTCAGCCTCCTGAAGCCCCTCCCACCGCTTCCCCTCAATTTAGGGATTTCATCTCCCGCTGTTTGCAGAGAGATCCCTCCCGCAGGTGGACTGCCTCTCGCTTGCTCTCTCACCCTTTTCTTGCTCTTCCTATTCCTCATCACAATCAGCTTCCTCCAAACCTCCATCAACTTCTTCCTCCTCCCCCGAAGCCCCTCTCTTCATAA 1077 0.5747 MRDEMRPIQLPPPTAAGSGSNNRDRPQRRRRDLTLPLPQRENNLAVPLPLPPSSAGSSGSGGGGGGTQQLIPFSELERLNRIGSGSGGTVYKVVHKATRRVYALKVIYGHHEESVRLQIHREIQILRDVDDANVVKCHDMYDHNAEIQVLLEFMDGGSLEGKHIPQEQQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYNAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPTASPQFRDFISRCLQRDPSRRWTASRLLSHPFLALPIPHHNQLPPNLHQLLPPPPKPLSS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02391 358 SUPERFAMILY Protein kinase-like (PK-like) 73 345 IPR011009 -
Rops4g02391 358 ProSiteProfiles Protein kinase domain profile. 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02391 358 Gene3D Phosphorylase Kinase; domain 1 66 155 - -
Rops4g02391 358 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Rops4g02391 358 SMART serkin_6 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02391 358 MobiDBLite consensus disorder prediction 53 67 - -
Rops4g02391 358 Gene3D Transferase(Phosphotransferase) domain 1 158 339 - -
Rops4g02391 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 38 332 - -
Rops4g02391 358 CDD PKc_MAPKK_plant_like 74 331 - -
Rops4g02391 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Rops4g02391 358 Pfam Protein kinase domain 77 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02391 358 MobiDBLite consensus disorder prediction 1 70 - -
Rops4g02391 358 FunFam Mitogen-activated protein kinase 2 156 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02391 Rops-Chr4 50984950 50986652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02391 5 347 MAP Kinase Kinase Gene Family AT1G51660 69.296 1.09e-166 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops4g02391 Pkinase 3.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02391 K13413 - gmx:100818488 542.732