Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02381 ATGGAAGATTCTGATCAAGTCACCAAATCTGAGCAAACTGAACAAGTGTGTAGTTTCTTCAGAAAACCTGTTAATAAGAAGAATATTAGAAAACGCACTGTTGATAATGAAGATGATGATGAGGACTCAAACAAGGAAAGTTCTTTGCTTCATATTCAAAAAAAGACGTCGAAGCCTGATAGTAAGTTGTTCTTTTCAAGTGGCTCTTCAAAAAGCTCTGCATCTGCTGAGCCAAGTGAAGAACCAGGGAAACCAGTCTTTCAGTTTGAGTCTTCAAAAGAGATTCAAGTTCAACATGATAGCAAAGCAACAGCAACTCTAGAGACTGAGACTGACTTTTCGAGAGATTCTCGAGCCATTCGTGAAAGGGCTCTTAAGCAAGCATCGGAGAGTCTGAAGGGGAAAGGCACAAGTTCTGAGGATGAGAAGTTATACAAGGGAATCAACAGTTACAAAGACTACAAGGCTGGCTTTCGTAGAGAGCAAACCATTGCCAGTGAAAAAGCTGGTGGGGCACATGGTCCTCTCAGGGCTTCGGCTCATATAAGAGTTTCAGCAAGATTTGATTATCAGCCTGACATATGTAAGGATTATAAGGAAACTGGTTACTGTGGCAAGGAAGATGAGATTAGCTACAGAAAGCCATTTGTGGATCCTGTTGCAACCAAGTGCAAGCACTACTTCTGCGAGCATTGTGCATTAAAGCATCATGCGAAGAATAAGAAGTGTTTTGTCTGCAACCAGCCAACACTTGGCATTTTTAATGTCGCTCACGAGATACGCAAGAAGATGGCTGAGGATAAAGAATCTCAGTCAATACGATCCATGGATTTCTTTGCTTAG 843 0.4152 MEDSDQVTKSEQTEQVCSFFRKPVNKKNIRKRTVDNEDDDEDSNKESSLLHIQKKTSKPDSKLFFSSGSSKSSASAEPSEEPGKPVFQFESSKEIQVQHDSKATATLETETDFSRDSRAIRERALKQASESLKGKGTSSEDEKLYKGINSYKDYKAGFRREQTIASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGKEDEISYRKPFVDPVATKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDKESQSIRSMDFFA* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02381 280 CDD RING-HC_RNF113A_B 213 255 - -
Rops4g02381 280 MobiDBLite consensus disorder prediction 30 118 - -
Rops4g02381 280 PANTHER ZINC FINGER PROTEIN 183 7 211 IPR039971 -
Rops4g02381 280 ProSitePatterns Zinc finger RING-type signature. 224 233 IPR017907 -
Rops4g02381 280 MobiDBLite consensus disorder prediction 30 58 - -
Rops4g02381 280 MobiDBLite consensus disorder prediction 59 77 - -
Rops4g02381 280 SUPERFAMILY RING/U-box 214 250 - -
Rops4g02381 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 211 266 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02381 Rops-Chr4 50891340 50899996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02381 12 268 C2H2 Transcription Factor Family AT1G01350 57.643 1.83e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02381 K13127 - rcu:8273881 362.073