Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02379 ATGGTACTTGTTCAAATTCCTATGTGCAATGAGAAAGAGGTATATGAACACTCTATTTCCACAGTCTGCCAACTTGATTGGCCAAAAGATCGCTTGCTCGTTCAAGTTCTGGATGACTCTGATGTTGAGGGCATACAGTGGTTAATCAAGGGAGAAGTCTCTAAGTGGAGCCAGAAAGGTGTCAATATCATCTATCGTCATAGGATGTTTAGAACCGGTTATAAAGCGGGCAATCTCAAGTCTGCAATGAACTGTGATTACGTGAAGGATTATGAATTTGTTGCTATTTTTTATGCTGATTTCCAACCAAATCCAGATTTCCTCAAGCAAACTGTTCCACACTTTAAGGGTAATCCTGAGCTGGCATTGGTTCAGGCTAGGTGGGCTTTTGTAAACAAGGATGAGAACTTACTGACACGTCTCCAAAATATTAATTTGTGCTTCCACTTTGAGGTTGAACAGCAGGTTAACGGGGTCTTCCTTAACTTCTTTGGTTTTAATGGAACTGCTGGTGTTTGGAGAATAAAAGCACTCGAAGAATCTGGTGGCTGGCTTGAGCGAACTACTGTAGAAGACATGGATATTGCAGTCCGGGCCCATCTGAATGGTTGGAAATTTATCTTTCTCAATGATGTAAAGGTGCTTTGTGAGCTTCCTGAATCATATAAAGCTTATAAGAAACAACAACATCGATGGCATTCTGGTCCCATGCAACTCTTTCGTTTGTGCCTTCCAGCCATCATCATAACCTCTAAGATTGCATTCTGGAAGAAAGCAAACCTTATATTTCTATTCTTTCTGCTTAGAAAGTTAATCCTCCCATTCTAG 828 0.407 MVLVQIPMCNEKEVYEHSISTVCQLDWPKDRLLVQVLDDSDVEGIQWLIKGEVSKWSQKGVNIIYRHRMFRTGYKAGNLKSAMNCDYVKDYEFVAIFYADFQPNPDFLKQTVPHFKGNPELALVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYKAYKKQQHRWHSGPMQLFRLCLPAIIITSKIAFWKKANLIFLFFLLRKLILPF* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02379 275 FunFam probable xyloglucan glycosyltransferase 5 1 218 - -
Rops4g02379 275 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 1 275 - -
Rops4g02379 275 Pfam Glycosyl transferase family group 2 100 268 IPR001173 -
Rops4g02379 275 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 219 IPR029044 -
Rops4g02379 275 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 270 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02379 Rops-Chr4 50886791 50889478 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02379 1 275 REM Transcription Factor Family AT2G24630 89.091 1.52e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02379 - - gmx:100778197 501.901