Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02378 ATGTTTGTCCCTGAAGCTAAGCTTCCTATCTGGGTTATTTGTTACATTCCTGTATTCATGTCATTCTTGAACATTCTTCCTGCCCCAAAATCCTTTCCCTTCATTGTTCCTTACCTGCTGTTTGAGAACACAATGTCGGTAACCAAATTCAATGCCATGGTATCCGGTTTGTTCCAGTTGGGAAGTTCATATGAATGGATCGTTACCAAAAAATCAGGTAGGTCATCAGAGCCTGACCTACTGGCTGCTGAAGAAAGGGATTCAAAGGCCATGAGTCTCCCACTTCACAGAGGGACTTCTGATAGTGGACTTTCTGAGCTTAACAAAATAAAGGAATGCCAAGAAACTGTCCCTAGACCTCCTGTAAAGAAAATGAACAAGATATATAAGAAAGAGCTAGCCCTTGCATTCTTGCTGCTGACTGCTGCAGTTAGGAGCCTGTTATCAGCACAAGGGATACACTTCTACTACTTATTATTTCAAGGTGTGTCGTTCCTCCTTGTAGGTCTGGATTTAATTGGTGAACAGATGAGCTAG 537 0.4227 MFVPEAKLPIWVICYIPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKSGRSSEPDLLAAEERDSKAMSLPLHRGTSDSGLSELNKIKECQETVPRPPVKKMNKIYKKELALAFLLLTAAVRSLLSAQGIHFYYLLFQGVSFLLVGLDLIGEQMS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02378 178 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02378 Rops-Chr4 50886791 50887824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02378 1 178 REM Transcription Factor Family AT2G24630 76.404 2.19e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02378 - - gmx:100778197 320.857