Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02376 ATGGAAAGCAAGGAGAACCTCGAAGCCACCAGACAGTTATTGACTACTAGCTTGGAAACATCAATTACTATTGCTTCTGCATTAGATGAGTCTGGTTCAAGATTGGAGCTACTTAAGCAGAGATGTCAATCCTTGCAAGCTTCACTCAGAACCTTCTCAATGCAAAAATGTTCATTTGTTGACATTGATCCTGGTGTAGACAGTGTTCTATGTTCTGCTGCTGCTGTCCTCAAGGTTTATGACTCAGTTCATCAGTTGGAGCATTCTCTCTTGACAGACCCCAGTTCTGATCTATGCACATACGTCTCAGACACAAAGAAGCTCGAAGAGGCACTGAAGCTTCTCACTGATAATTGCAGGTTAGCAGTTAGCTGGTTGAAGGGCGTTTTTGAGTTTTTACAAGACAAGGCAATCATCAATGAGCTTTACCTATTGAATATAAAGAAATCCTTGAGAATATTGCAAGAGTTGCAGCTCATAGAGGAAGGTGCAAGCCTTGATGGAGGCCTTCTCAGTTCTGCCTTTGACAAACTAGAGAATGAGTTCTACAGGCTTCTGATGGCAAACTCGATGCCTCTTCCTTTGGTTTCATTAACATCACACATTGACCACCAAGCCAGCATCACCACACAAGCTTTGCCATTGCCAGGTTCTTTAATAAGGAAGTTGCAGGCCATCACTGAGAGATTAAATGCTAATAACAGGCGAGATAGGTGTCAATCTATATATATTGAAGTTCGAGGTATGAATGCTCGTCGAAGCTTGAAGACTTTGGATTTGAGTTACCTTGATATTTCAACAGCTCAATTTGAGGATGTGCAGAGTATGGAGAGTTACATAGACCAATGGGGCAGCCATTTGGAGTTGGTTGTGAAGAAACTGCTTGAGATTGAGAACAAGCTTTGTACTAATGTCTTTGAGAAAATTGGTCCAGAAGCATGGATGGAGTGTTTTGCAAGGATTGCCATTGAATCGGGAATTCTTTCTTTTATTCGGTTTGGAAGGGTTGTTGCTGAGAGGAAGAATGACCCCTTCAAGTTGTTGAACTTGCTGTCCATATTCAGAGTCTTGAATGGTCTGAGACTAAAATTCAACCAGCTTTTCAGAGGAAAAGCTTGCGAAGAAATTAGAACTGTGACAAAGGATCTCATCAACAAAGTTGTCAATGGTGCCAGTGAGATATTCTGGAAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAAGTTCTCCTCCCCCTGATGGCAGTGTTCCCAGGCTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTGGTTGGCGATACGTATAGGCCACAATTGACACAGGTTTTGGAAATACATCTTAGTTGGAGACAGGAAGCATATGAAGAGGGTATTGTTTTAACCCAAATATATACCACAGTTAAGGAAGTTGCGGTAAATTTGGATGCTTGGTCAAAGGCCTACGAAGATATCACTTTGTCCTACCTTTTCATGATGAATAATCACTGTCATTTCTACAACTTGAGGGGTAGTGTGCTTGGAAAAATGATGGGAGATTCTTGGTTAAGAGCACATGAACAATATAAGGACTATTATGCAGCACTTTATTTGAAGAATAGCTGGGGAAAGCTTCAACCTATTCTTGTAGGCCAAAAGGATATACTATCACCGTCTGATGGGCGAGTGACTAGCCAAGATTTGGCTAAGAGACTTCACGCTTTCAACCTAGCTTTTGACGAAAGGTACAAGAATCAATCTAATTGGGTAATCTCTGATGAGATCTTGAGGGAAAATGTATGCAAGCATTTGGTGGAAGGTATTATACCAATCTACAGGGCCTACTTGAAGAATTACATTTTGTCAATTGAAAATGATGCCAAGGTTGACAAGCATATTAAATATACAGCACAGAGTTTGGAGAATAGGATTAGGTCTTTGTTTCAGCCCAAGCTGAGGAAGCATGGTAGCATTAAACAGGCAGATTTGATTAGTAAAATAAAAGAAGTGAGCCATCAGTTTCGCTTGACTCTAACTGCTCTATAG 2022 0.4105 MESKENLEATRQLLTTSLETSITIASALDESGSRLELLKQRCQSLQASLRTFSMQKCSFVDIDPGVDSVLCSAAAVLKVYDSVHQLEHSLLTDPSSDLCTYVSDTKKLEEALKLLTDNCRLAVSWLKGVFEFLQDKAIINELYLLNIKKSLRILQELQLIEEGASLDGGLLSSAFDKLENEFYRLLMANSMPLPLVSLTSHIDHQASITTQALPLPGSLIRKLQAITERLNANNRRDRCQSIYIEVRGMNARRSLKTLDLSYLDISTAQFEDVQSMESYIDQWGSHLELVVKKLLEIENKLCTNVFEKIGPEAWMECFARIAIESGILSFIRFGRVVAERKNDPFKLLNLLSIFRVLNGLRLKFNQLFRGKACEEIRTVTKDLINKVVNGASEIFWKLPAQVKLQRPSSPPPDGSVPRLVSFVTDYCNQLVGDTYRPQLTQVLEIHLSWRQEAYEEGIVLTQIYTTVKEVAVNLDAWSKAYEDITLSYLFMMNNHCHFYNLRGSVLGKMMGDSWLRAHEQYKDYYAALYLKNSWGKLQPILVGQKDILSPSDGRVTSQDLAKRLHAFNLAFDERYKNQSNWVISDEILRENVCKHLVEGIIPIYRAYLKNYILSIENDAKVDKHIKYTAQSLENRIRSLFQPKLRKHGSIKQADLISKIKEVSHQFRLTLTAL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02376 673 SUPERFAMILY Cullin repeat-like 76 640 IPR016159 -
Rops4g02376 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 141 640 IPR004140 GO:0000145|GO:0006887
Rops4g02376 673 Pfam Exo70 exocyst complex subunit 282 637 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops4g02376 673 Gene3D Exocyst complex component Exo70 137 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02376 Rops-Chr4 50878604 50880625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02376 5 660 EXO70 exocyst subunit family AT4G31540 49.099 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02376 K07195 - gmx:121175138 1056.97