Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02354 ATGATGAAGGCTTTGATCAATGAACAGAAGAAGCGGATAGCTTCAGGAAAGTTGTTATCTGAAGCAAAAGAACTGACAGAAGAACAAGTTTCCATGCTGCTTTGGGAGACCATTATTGAGACATCAGATACTACATTGATCACAACAGAGTGGGCTATGTATGAACTTGCTAAAGACAAAAATCATCAGGACCGTCTCTATGAGGAGATAAAAAATGTGTGTGGAAATGAAAAGCTTACTGAAGACAAATTATCTAAGCTACCATACTTGGGGGCTGTCTTCCATGAAACTTTAAGGAAGCATAGTCCAGCTCTAGTAGTTCCACTAAGATATGTTCAAGAAGATACCCAACTGGGGGGTTATCATATTCCTGCTGGAAGCCAGATAGCAATAAACATATATGGATGCAACATGGACAAGAACCAGTGGGAGAATCCTTACCAGTGGATGCCTGAGAGATTTCTTGATGAGAAATATGACCCCATGGATTTGGACAAGACCATGGCCTTTGAAGCAGGAAAGAGGGTGTGTGCAGGCTCTCTTCAAGCCATGTTGATAGCTTGCACAGCACTTGGAAGATTGGTTCAGGAATTTGAGTGGAAACTCAAAGAAGGTGAGGAAAAGGAGGATGTGGATACGGTAGGTCTTACCACCCATAAGTTCCATCCCCTGCAAGTGATACTCAAGCCAAGAAATATATAG 702 0.4202 MMKALINEQKKRIASGKLLSEAKELTEEQVSMLLWETIIETSDTTLITTEWAMYELAKDKNHQDRLYEEIKNVCGNEKLTEDKLSKLPYLGAVFHETLRKHSPALVVPLRYVQEDTQLGGYHIPAGSQIAINIYGCNMDKNQWENPYQWMPERFLDEKYDPMDLDKTMAFEAGKRVCAGSLQAMLIACTALGRLVQEFEWKLKEGEEKEDVDTVGLTTHKFHPLQVILKPRNI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02354 233 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 1 232 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Rops4g02354 233 PRINTS P450 superfamily signature 168 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 PRINTS P450 superfamily signature 40 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 PRINTS P450 superfamily signature 92 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 SUPERFAMILY Cytochrome P450 5 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 PRINTS E-class P450 group I signature 132 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 PRINTS E-class P450 group I signature 177 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 PRINTS E-class P450 group I signature 49 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 PRINTS E-class P450 group I signature 167 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 Pfam Cytochrome P450 21 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02354 233 Gene3D Cytochrome P450 1 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02354 Rops-Chr4 50700289 50701302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02354 1 231 Cytochrome P450 AT5G25900 64.167 3.47e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02354 K04122 - gmx:100802970 382.874