Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02348 ATGGCTTCCAAGACAGAAGGAAAGGCTATTGGCATTGACCTTGGCACCACCTACAGTTGCGTTGGTGTGTGGCAAAATGACCGTGTTGAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCTTCCTATGTAGCTTTCACTGACACAGAGCGTCTCATAGGAGATGCTGCAAAGAATCAGATAAGATACTGTTCTGAATCTAAGAGGATAAACTGCGTTTTGATTTCCAAGTAG 237 0.443 MASKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQIRYCSESKRINCVLISK* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02348 78 SUPERFAMILY Actin-like ATPase domain 8 65 IPR043129 -
Rops4g02348 78 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops4g02348 78 Gene3D - 1 78 - -
Rops4g02348 78 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops4g02348 78 PRINTS 70kDa heat shock protein signature 36 48 - -
Rops4g02348 78 PANTHER HEAT SHOCK PROTEIN 70KDA 9 63 IPR013126 GO:0005524|GO:0140662
Rops4g02348 78 FunFam heat shock 70 kDa protein-like 3 78 - -
Rops4g02348 78 Pfam Hsp70 protein 9 62 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02348 Rops-Chr4 50620677 50622908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02348 1 62 Calmodulin-binding Proteins AT5G02490 90.323 4.94e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02348 K03283 - pop:18094242 127.872