Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02347 ATGATAATCAACGTGAGAGAGTCGACGATGGTGAGGCCGGCGGAGGAGGTGGCGCGGCGGAGGTTGTGGAATTCGAACGTGGACCTGGTGGTGCCAAATTTCCACACGCCAAGCGTGTACTTCTACAGGCCCAACGGCGTTTCCAACTTCTTCGACGCTAAGGTTATGAAGGAGGCTCTCAGCAAGGTGCTCGTTCCGTTTTATCCAATGGCCGGCCGTCTCCGCCGCGACGAAGACGGCCGTGTGGAGATTGACTGCGACGGCCAAGGGGTGCTCTTCGTGGAGGCCGACACCGGCGCCGTCATTGACGATTTTGGTGACTTTGCGCCCACTCTTCAGCTCCGGCAGCTTATCCCCGCCGTGGATTATTCACGCGGAATTGAAACGTATCCGCTGTTAGTGTTACAGGTAACATATTTCAAATGTGGAGGGGTGTCACTGGGTGTTGGTATGCAACATCATGTAGCAGATGGAGCTTCAGGTCTTCACTTTATAAACACATGGTCAGATGTGGCTCGTGGTTTGGATGTTTCCATTCCACCATTCATTGACCGGACATTACTTCGTGCCCGTGATCCACCTCGACCTGTTTTTGATCACATTGAGTATAAGCCCGCACCAGCCATGAAGTCTCCCCCACAACCCACAAAACCAGGTTCAGACAGTGCAGCAGTCTCTATTTTCAAACTGACTCGTGACCAACTCAATATATTGAAAGGTAAGTCCAAAGAAGATGGCAACACAATCAGCTACAGCTCTTATGAGATGTTGGCTGGTCATGTGTGGAGAAGTGTGTGCAAGGCGAGAGCACTTCCTGATGATCAAGAGACCAAATTGTACATTGCAACTGATGGACGGTCAAGATTGCAACCTCCCCCTCCTCCAGGTTACTTTGGCAATGTGATCTTCACAACCACACCAATAGCTGTGGCAGGTGATCTCATGTCAAGACCAACATGGTATGCTGCAAGTAGAATCCACAATGCCTTGTTACGTATGGATAATGAATATTTGAGATCTGCTCTTGATTTTCTAGAGCTACAACCTGACCTGAAAGCTCTTGTTCGTGGAGCACATACTTTTAAGTGTCCAAATCTTGGTATCACTAGCTGGGCAAGGCTTCCGATACATGATGCTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCATACGAGGGGCTATCTTTCATAATTCCAAGCTCAACAAATGATGGGAGCTTATCTGTGGCAATAGCTCTTCAGCCTGAGCACATGAAAGTGTTTAAGGAATTGTTGTATGACATTTGA 1302 0.4892 MIINVRESTMVRPAEEVARRRLWNSNVDLVVPNFHTPSVYFYRPNGVSNFFDAKVMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLQLRQLIPAVDYSRGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPVFDHIEYKPAPAMKSPPQPTKPGSDSAAVSIFKLTRDQLNILKGKSKEDGNTISYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPPPPPGYFGNVIFTTTPIAVAGDLMSRPTWYAASRIHNALLRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQPEHMKVFKELLYDI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02347 433 Gene3D - 213 433 IPR023213 -
Rops4g02347 433 Gene3D - 1 205 IPR023213 -
Rops4g02347 433 FunFam Tryptamine hydroxycinnamoyl transferase 210 431 - -
Rops4g02347 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 430 - -
Rops4g02347 433 Pfam Transferase family 3 429 - -
Rops4g02347 433 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02347 Rops-Chr4 50595725 50599441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02347 1 433 Monolignol Biosynthesis Gene Families AT5G48930 78.753 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02347 K13065 - gmx:100820075 829.32