Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02346 ATGGTGCGGCCGGCGCAGGAGATGGGGCGGTGGAGGGTGTGGAACTCCAACGTGGACCTGGTGGTGTCAAATCTCCACACACCAAGCGTGTACTTCTACAGGTCCAACGGCGCCTCCAACTTCTTCGACTCAAAGGTTCTAAAGGAGGCTCTGGGCAAGGTGCTCATCCATTTCTACCGAATGGCCGGCCGCCTCCGCCACGACGAAGACGGCCGCGTCGAGATTGACTGCGACGGCCAAGGTGTGCTCTTCGTGGAGGCCGACACCGACGCCGTCATCGACGATTTTGGAGATTTTGCACCCACCCTTAAGCTCCGGCAGCTTATCCCAGCCGTCGATTATTCACGCGGAATCGAAGCCTATCCGCTAGTGTTGCAGGTAACATGTTTCAAATGTGGAGGGGTGTCACTGGGTGTTGGTATGCACCATCGCGTAGCAGATGGAGCTTCTGGCCTTCACTTTATAAACACATGGTCAGATGTGCTCAATATACTCAAAGCAAAGGCCAAAGAAAATGGCAACACAATCAACTATAGCACTTTTGAGGTGTTGGCTGGTCACATGTGGAGAAGTGTATGCAAGGCAAGAGCACTTCCTGATGATCAAGAGACCAAATTGTACATTGCAACTGATGGACGGTCAAGGTTGCAACCTCCCCTTCCATCAGGTTACTTTGGCAATGTAATCTTCAGAACCACACCTATAGCTATGGCAGGTGATCTTATGTCAAAACCAACATGGCCTCACGGTATCTCGGCCCTTCAAGGCCTCAACGACATCTCGGCCCCTCAAGGCCTCAAAGACATCTCGGCCCCTCAAGGCCTCAAAGACATCTCGACCCCTCAAGCCCTCAACGACATCTCAGCCCCTCAAGGCCTCAACAACATCTCGGTCTCTAAGGCCTCAAGGCAAAAAAATGCTAGTGATACCGGGATGAATGCAAGACTACTAAATATGATGGCACTTGAAATGACGCCATAG 981 0.5209 MVRPAQEMGRWRVWNSNVDLVVSNLHTPSVYFYRSNGASNFFDSKVLKEALGKVLIHFYRMAGRLRHDEDGRVEIDCDGQGVLFVEADTDAVIDDFGDFAPTLKLRQLIPAVDYSRGIEAYPLVLQVTCFKCGGVSLGVGMHHRVADGASGLHFINTWSDVLNILKAKAKENGNTINYSTFEVLAGHMWRSVCKARALPDDQETKLYIATDGRSRLQPPLPSGYFGNVIFRTTPIAMAGDLMSKPTWPHGISALQGLNDISAPQGLKDISAPQGLKDISTPQALNDISAPQGLNNISVSKASRQKNASDTGMNARLLNMMALEMTP* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02346 326 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 170 244 - -
Rops4g02346 326 Gene3D - 1 190 IPR023213 -
Rops4g02346 326 Pfam Transferase family 1 162 - -
Rops4g02346 326 Pfam Transferase family 165 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02346 Rops-Chr4 50574437 50586921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02346 160 247 Monolignol Biosynthesis Gene Families AT5G48930 75.000 3.34e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02346 K13065 - gmx:100806561 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00059 7 842368 847534 Rops4g02346 4 50574437 50586921 PCT