Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02345 ATGGTGAGGCCGGCGGAGGAGGTGCCCAGGCGGAGGGTGTGGAGCTCCAACATGGACTTGGTGGTTCCAAATTCCCACACGCCAAGCGTGTACTTCTACAGTTCCAACGGCGCCTCCAACTTCTTCGACGCAAAGATTCTCAAGGAGGCTCTCAGCAAGGTGCTCGTTCCGTTCTACCCAATGGCCGGCCGCCTCTGCCACGACGAAGACGGTCGCGTAGAGATTGACTGCGATGGCCAAGGGGTGCTCTTCGTGGAGGCCGACACCGACGCCGTCATCGACAATTTTGGTGAGTTCGCGCCCACTCTTCAGTTCCGTCGGCTTATCCCCGCCGTCGATAATTCACGTGGAATGGAAACCTATCCCTTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGGGTGTCACTGGGTGTTGGTATGCACCATCGTGTAGCAGATGGAGCTTCTGGTCTTCACTTTGTAAACACATGGTCAGATGTGGCTCGTGGTTTGGATGTTTCCATCCCACCATTTATTGATCGGACCTTACTCCGCGCCCGAGATCCACCTCAACCTATTTTTGATCACATTGAATACAAGTCCCCACCAGTCATGAAGAATACTCCTCCAAAACCAGGGTCAGATAATGTGGAGATATGTATTTTCAAATTGACTCGTGACCAACTCAATATACTAAAAGATAAGTCCAAAGATGGCAACACAATCCACCACTACAGCTCTTTTGAGGTGTTGGCTGGTCACGTGTGGAGAAGTGTATGCAAAGCAAGAGAACTTGTTGACGATCAAGAGACCAGACTGCACATTGCAACTGATGGACGGTCAAGGTTGCAACCTCCCCTTCCACTAGGTTACTTTGGCAATGTTATCTTCACTACCACACCTATAGCTATGGCAGGTGATCTCATGTCAAAACCAACATGGTACGCTGCAAGCACAATCCACAATGCCTTGTTACGAATGGACAACGAGTATTTGAGATCCACTATTGACTATCTACAGCTACTACCTAATTTAAAAACTTTCGTCCGTGGAGCAGATTCTTTCAAGTGTCCTAATCTTTGTATCGTTAGCTGGGTTGGGCTTCCGATCCATGATGCTGATTTTGGTTGGGGAAAGCCTATATTCATGGGACCTGGTGGGATTGCATTAGAGGGTATAGCTTTCATAATTCCAACCTCAACAAATGATAGGAGCTTATCTGTGGCAATAGCTCTTCAACCTGAGCATATGAAAGTGTTTATGGAATTATTGTATGACATTTGA 1269 0.4768 MVRPAEEVPRRRVWSSNMDLVVPNSHTPSVYFYSSNGASNFFDAKILKEALSKVLVPFYPMAGRLCHDEDGRVEIDCDGQGVLFVEADTDAVIDNFGEFAPTLQFRRLIPAVDNSRGMETYPLLVLQVTYFKCGGVSLGVGMHHRVADGASGLHFVNTWSDVARGLDVSIPPFIDRTLLRARDPPQPIFDHIEYKSPPVMKNTPPKPGSDNVEICIFKLTRDQLNILKDKSKDGNTIHHYSSFEVLAGHVWRSVCKARELVDDQETRLHIATDGRSRLQPPLPLGYFGNVIFTTTPIAMAGDLMSKPTWYAASTIHNALLRMDNEYLRSTIDYLQLLPNLKTFVRGADSFKCPNLCIVSWVGLPIHDADFGWGKPIFMGPGGIALEGIAFIIPTSTNDRSLSVAIALQPEHMKVFMELLYDI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02345 422 Gene3D - 1 195 IPR023213 -
Rops4g02345 422 FunFam Spermidine hydroxycinnamoyl transferase 1 194 - -
Rops4g02345 422 Pfam Transferase family 1 417 - -
Rops4g02345 422 Gene3D - 196 421 IPR023213 -
Rops4g02345 422 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 417 - -
Rops4g02345 422 FunFam Tryptamine hydroxycinnamoyl transferase 200 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02345 Rops-Chr4 50563900 50570736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02345 1 422 Monolignol Biosynthesis Gene Families AT5G48930 69.176 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02345 K13065 - gmx:100820075 693.345