Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02343 ATGAACTCTAAGCAGAACACGATGTCAGCAGATTTCACTTTTGAGATGGGGATATACCTCAGTGCGCCGAAAACAGAGAAGGCCTCTGAAGATGGCGAGAACGACAGGCTTCGCTTTGGTTTGTCTTCCATGCAGGGCTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCCATATTTGGACGAGTCTACAGCTTACTTTGGTGTTTATGATGGCCATGGAGGCAAAGCAGTTTCAAAATTCTGTGCCAAGTATCTGCACCAGCAGGTGCTTAAGCATGAAGCTTATGAAGCTGGAGATATAGGCACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGCGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCATGTCGATGATTGGGCTTTTGAGGAGGGACCCCATTCTGATTTTAGTGGACCAAACTCTGGATGCACAGCTTGTGTGGCTGTCATGCGAGGAAACAAACTTGTTGTTGCAAATGCCGGTGATTCTAGATGCGTATTATCAAGGAAGGGCCAGGCTCACAATTTGTCTAAAGATCACAAGCCTGACCTTGAGGCTGAGAAAGACAGGATTCTGAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTGAACTTGGCAAGAGCAATTGGAGATATGGAATTCAAGCAAAACAAGTATTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCAGACATAACTTCAGTTGAGCTTTGCGATGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGACTGCATGTCTAGCCAACAGCTTGTGGACTTCATACATGGACAGTTAAAGACAGAGAACAAACTTTCTGCGATATGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTAAAAAATCCTTCAAGTCCAGGTGCTTCTGTCACAAATCAGCCTGAGTCGTCTGCTCAACCGTCTGAAGCTGATAGAAGTTCAGAGAAAATAGAACTGAAGTGA 1131 0.4483 MNSKQNTMSADFTFEMGIYLSAPKTEKASEDGENDRLRFGLSSMQGWRASMEDAHAAHPYLDESTAYFGVYDGHGGKAVSKFCAKYLHQQVLKHEAYEAGDIGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANDHVDDWAFEEGPHSDFSGPNSGCTACVAVMRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSAICEKVFDRCLAPTAGGEGCDNMTMILIQLKNPSSPGASVTNQPESSAQPSEADRSSEKIELK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02343 376 PANTHER PROTEIN PHOSPHATASE 2C 30 342 IPR015655 GO:0004722|GO:0006470
Rops4g02343 376 Pfam Protein phosphatase 2C 155 328 IPR001932 -
Rops4g02343 376 Pfam Protein phosphatase 2C 38 119 IPR001932 -
Rops4g02343 376 SUPERFAMILY PP2C-like 18 346 IPR036457 -
Rops4g02343 376 MobiDBLite consensus disorder prediction 347 364 - -
Rops4g02343 376 CDD PP2Cc 38 343 IPR001932 -
Rops4g02343 376 Gene3D - 15 344 IPR036457 -
Rops4g02343 376 ProSiteProfiles PPM-type phosphatase domain profile. 38 343 IPR001932 -
Rops4g02343 376 SMART PP2C_4 28 341 IPR001932 -
Rops4g02343 376 MobiDBLite consensus disorder prediction 347 376 - -
Rops4g02343 376 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02343 Rops-Chr4 50534707 50544111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02343 16 347 PP2C-type Phosphatase Gene Family AT2G25070 75.676 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02343 K17499 - gmx:100776787 684.871