Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02340 ATGGCAGCCTCATCCCACTTCATGAGTGCCCTGTTGCTACTCATCTCAGCCCTTATCACACTCTCTCCGGTCACCGCCACTGACCACATTGTTGGTGCTAACCGTGGCTGGAACCCTGGCATTAACTACACTCTTTGGGCCAACAACCACACTTTCTATGTTGGCGACCTTATCTCATTCAGGTACCTGAAGACACAGTACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACTACAGAAGGGGCTGTTGGAAATTGGAGTAGTGGGAAGGATTTCATACCCCTGAATAAGGCCAAGAGATATTACTTCATTTGTGGCAATGGTCAATGCTTCAATGGAATGAAGGTCTCTGTTATTGTCCATCCACTTCCTCCTCCTCCCTCTGCTGCAATTGCTGCTGAACATTCCACACCAAAATCTGCTGCTCCTATGCTCTTGGAATGGGAACTTCACTCTCTAGCAGTGTCTTTTATTTTAGTTTGGTTTGGGTTTGGGTTTGTTTTGATGTAG 519 0.4644 MAASSHFMSALLLLISALITLSPVTATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYLKTQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVSVIVHPLPPPPSAAIAAEHSTPKSAAPMLLEWELHSLAVSFILVWFGFGFVLM* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02340 172 FunFam Lamin-like protein 25 126 - -
Rops4g02340 172 SUPERFAMILY Cupredoxins 26 124 IPR008972 -
Rops4g02340 172 Gene3D - 25 126 IPR008972 -
Rops4g02340 172 ProSiteProfiles Phytocyanin domain profile. 27 125 IPR003245 GO:0009055
Rops4g02340 172 PANTHER BLUE COPPER PROTEIN 26 135 IPR039391 GO:0009055
Rops4g02340 172 Pfam Plastocyanin-like domain 37 117 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02340 Rops-Chr4 50518750 50519920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02340 1 133 Phytocyanin Superfamily AT5G15350 41.481 1.23e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02340 - - adu:107463738 243.432