Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02328 ATGTCTCTGAAGATAGCAGCTGAAAGTTGGCCTCAATCAGCATCAGAGAGGGTGAAAGAGCCATTGGTGGTGGTAAGAGAGTATGATGAAGAGAGACACAAAGTGGCAGTGGAGAAATTAGAGAAACTTTGTGAAGTTGGGCAGAGAGGAAAACCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGTCGTATCCGTCACTTTCAATTACATGTCATGATGGTTGCTGAATATGGAGAAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTGAAAACAGTTACAAGAGGGAATTCAGTTTATGTAAAGCTAGCTTATGTTTTGGGGCTCAGAGTCTCTCCCCAACACAGGAGATTCGGCATTGGCACAAAACTAGTTGTAAATTTAGAGGAGTGGTGCAAGCAAAAGGGGGCCAAGTATGCATATATGGCAACTGATTGTACAAATGAGCCTTCCATCAATTTGTTCACAAAAAAATGTGGGTACTCAAAGTTCAGGACTCTAACCATGTTAGTTCAACCTGTTCATGCTCACTACAAGCCAATTAGCACCAGTGTTGCTGTGCTTCACCTTCCACCAGTCCTAGCTGGGTCCATGTATAACCACATGTTTGCCAATTCAGAATTTTATCCTAGAGACATTGAGTCAATTTTGTCAAACAAGCTGAATTTGGGCACATTCATGGCCATCCCAAAGAAGTACCTCTCAAAATGTGATCCAAAAAGGGGAATTCTCCCTCCAAGCTATGCCATATTAAGTGTGTGGAACACCAAAGAAGTGTTCAAATTGCAAGTGAAAGGGGTGTCACCACTGGCACATGCATGCTGTGTAGGCACAAGGTTATTGGATGAATGGATGCCATGGCTAAGGCTACCTTCATTTCCTGATGTTTTTAGGCCATTTGGGATATATTTTCTGTATGGACTACACATGGAGGGAAAGTGTGGTACACACCTCATGAAGTGCCTATGTGGATTTGTGCATAACATGGCCAGAGATCATGGTGGTTGTGGGGCCATTGTGGCTGAACTGAGCCAAAGGGACCCAGTTAGAGAAGCAGTCCCACATTGGAGAAAGTTCTCATGGGCAGAGGACATGTGGTGCATTAAGAATCTTGAGGACACGAAGCAGCATATCCCTGAAAAATGTGGGCCATCTGATTGGTTTACTTCTAGATCATCTTCACCAGTAATTTTTGTTGACCCTCGTGATTTTTGA 1224 0.4387 MSLKIAAESWPQSASERVKEPLVVVREYDEERHKVAVEKLEKLCEVGQRGKPSLVTDLMGDPICRIRHFQLHVMMVAEYGEEGEVVGVIRGCVKTVTRGNSVYVKLAYVLGLRVSPQHRRFGIGTKLVVNLEEWCKQKGAKYAYMATDCTNEPSINLFTKKCGYSKFRTLTMLVQPVHAHYKPISTSVAVLHLPPVLAGSMYNHMFANSEFYPRDIESILSNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKEVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGIYFLYGLHMEGKCGTHLMKCLCGFVHNMARDHGGCGAIVAELSQRDPVREAVPHWRKFSWAEDMWCIKNLEDTKQHIPEKCGPSDWFTSRSSSPVIFVDPRDF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02328 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 197 IPR000182 GO:0016747
Rops4g02328 407 Pfam Acetyltransferase (GNAT) family 75 164 IPR000182 GO:0016747
Rops4g02328 407 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 19 407 - -
Rops4g02328 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 170 IPR016181 -
Rops4g02328 407 CDD NAT_SF 76 144 - -
Rops4g02328 407 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Rops4g02328 407 Gene3D - 21 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02328 Rops-Chr4 50417048 50419654 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops4g02328 Acetyltransf_1 1.1e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02328 - - gmx:100802670 741.88