Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02323 ATGGCGGGGCAATCACAGCGTCTCAATGTGGTCCCCACAGTGACAGTGCTTGGAGTGGTGAAAGCACGTTTGGTTGGAGCAACAAGAGGGCACGCTCTTCTGAAGAAGAAGAGTGATGCTTTAACGGTTCAGTTTCGTCAGATCCTGAAGAAGATCGTGTCCACAAAGGAATCAATGGGTGACATCATGAAAACTTCCTCTTTTGCCTTAACTGAGGCCAAGTATGTTGCTGGTGACAACATTAAACATGTTGTCCTCGAGAATGTTAAAGAAGCTTCCCTCAGGGTCCGTTCTCGTACGGAGAATGTGGCTGGGGTTAAGCTTCCTAAGTTCGAATACACTGCTGATGGCGAGGCCACGAAGAACGACCTCACTGGATTGGCGAGGGGTGGACAACAGGTGCAGCAATGCCGTGCTGCTTATATAAAAGCAATTGAGGTTCTTGTTGAGCTTGCTTCGCTTCAGACCTCTTTCGTCACCCTTGATGAGGCCATCAAGACCACTAACCGTAGGGTTAATGCTCTTGAGAATGTTGTCAAGCCAAGGCTTGAGAATACCATCACTTACATTAAAGGGGAGTTGGATGAACTTGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGATATAAGAAGAGGGAAATTGAGAGGAAGAGGCAGTTGAAGGCCTCTGAGGACAAGTTCCCCTTGCACAAACCGGTCTCCTTCAATTCCCCTAACAATTTGTTGTCTGTGGCAAATGACAGAGATGAGGATATCATTTTCTGA 771 0.4682 MAGQSQRLNVVPTVTVLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYTADGEATKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFVTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDFFRLKKIQGYKKREIERKRQLKASEDKFPLHKPVSFNSPNNLLSVANDRDEDIIF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02323 256 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 256 IPR002699 GO:0046961
Rops4g02323 256 Gene3D - 1 199 - -
Rops4g02323 256 FunFam V-type proton ATPase subunit D 1 199 - -
Rops4g02323 256 Coils Coil 180 200 - -
Rops4g02323 256 Pfam ATP synthase subunit D 19 209 IPR002699 GO:0046961
Rops4g02323 256 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02323 Rops-Chr4 50312527 50314010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02323 1 256 Primary Pumps ATPases(2) AT3G58730 76.046 3.53e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02323 K02149 - gmx:100801612 427.943