LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g02320	ATGCCTTCTGACATTTCATCAGACTCCTCCGGCCAAACCGTGTGTGTCACCGGCGCCGGTGGGTTCATAGCCTCTTGGCTGGTCAAACTTCTCTTAGAGAAAGGCTACACTGTCAGAGGGACCGTGAGAAACCCAGATGATCCGAAGAATGGTCACTTGAAAGAGTTGGAAGGAGCTAGGGAGAGGTTAACTTTGCATAAGGTTGATCTCCTTGATTTTGATTCTATTACAGCTGTTTTTCACGGATGCGATGGTGTCTTCCACACGGCCTCTCCTGTCACTGACAATCCTGAAGAGATGTTGGAGCCAGCAGTGAAAGGAACCAAGAATGTGATTATGGCAGCTGCAGAAGGACAAGTGCGACGTGTGGTGTTCACTTCATCCATTGGCACAGTCTATATGGATCCCACTAGAAGCAGGGATGAGGTAGTTGATGAGTCATGCTGGAGCGATTTGGAGTACTGCAAGGACACCAAGAACTGGTATTGCTATGGGAAGACCGTGGCTGAACAAACAGCATGGGATATAGCAAAAGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTTCTTGGACCATTGCTACAACCCACCATTAATGCTAGTACAATTCACATTCTCAAGTACCTCACTGGCTCAGCTAAGACCTTTGTGAATGCCACTCAGGCTTACGTAGATGTTAAGGATGTGGCATTAGCTCATGTTCTTGTGTACGAGACACCTTCTGCTTCTGGTCGTTACATATGTGCCGAAAGTTCGTTGCATCGTGGTGAGCTAGTTGAAATTCTGGCCAAGTTTTTCCCTGAGTACCCACTTCCTACCAAATGTTCAGATGAAAAGAACCCGAGGGTAAAACCTTACATATTTTCAAATAAAAAGCTGAGAGATATGGGATTGGAATTCATCGCAGTGAAGCAGTGTCTATATGACACAGTTAGGAGCCTGCAGGAGCAAGGCCACCTTCCTGTGCCCCCAAAGCAAGATGACTCTATTTAA	1002	0.4671	MPSDISSDSSGQTVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDPKNGHLKELEGARERLTLHKVDLLDFDSITAVFHGCDGVFHTASPVTDNPEEMLEPAVKGTKNVIMAAAEGQVRRVVFTSSIGTVYMDPTRSRDEVVDESCWSDLEYCKDTKNWYCYGKTVAEQTAWDIAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTFVNATQAYVDVKDVALAHVLVYETPSASGRYICAESSLHRGELVEILAKFFPEYPLPTKCSDEKNPRVKPYIFSNKKLRDMGLEFIAVKQCLYDTVRSLQEQGHLPVPPKQDDSI*	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g02320	333	CDD	FR_SDR_e	14	301	-	-
	Rops4g02320	333	Gene3D	-	3	333	-	-
	Rops4g02320	333	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	12	314	-	-
	Rops4g02320	333	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	5	318	IPR036291	-
	Rops4g02320	333	FunFam	Cinnamoyl-CoA reductase 1	5	333	-	-
	Rops4g02320	333	Pfam	NAD dependent epimerase/dehydratase family	14	245	IPR001509	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g02320	Rops-Chr4	50272215	50276716	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops4g02320	11	277	Monolignol Biosynthesis Gene Families	AT1G80820	75.281	4.67e-146	411

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g02320	K09753		-	gmx:100799994	583.948