Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02314 ATGGACAATGAGGAAATCCCATCAGTACCTTCTACACCTGCAACACCAGGAACTCCCGGTGCTCCTCTCTTTGGTGGGTTCAAGTCTGAGAGAACTGAGAATGGTATTGGTAGGAAGTCCCTCCTCAAGAATTGCAGATGTTTCGGTGTTGAAGAATGGACCTTAGAAGATGGAGCCTTGCCCAGAGTTTCTTGCTCTTTGCCACCCCCTCCTGTTCCTCTAGCAAAAAAGGTAGGAGCTGAGTTTATAGGCACTTTCATTCTCATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGATACAAGGCTCAGAGACTCTGATTGGATGTGCTGCAGCTACTGGACTTGCTGTTATGATCATTATCCTCTCCACTGGTCACATCTCTGGTGCTCATCTCAACCCTGCTGTCACCGTTTCCTTTGCTGCATTAAAGCACTTCCCATGGAAGAATGTGCCAGTGTATATTGGTGCACAAGTTTTGGCATCAATATGTGCTGCATTTACTCTCAAGGGTGTTTTTCACCCTTTCATGAGTGGTGGTGTCACGGTTCCTTCAGTAGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGTTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAGCTAGCGGGAATCGCGGTGGGCGCCACTGTAATGCTTAACATACTCATAGCCGGGCCAGCAACAGGAGGTTCAATGAACCCAGTAAGAACATTAGGTCCAGCAATTGCTGCAAACAACTTCAATGGTGTATGGTTGTATCTCATAGCTCCCATACTTGGAGCTCTAGCTGGGGCAGGTGCCTACACTGTGGTTAAGCTGCCTGATGAAGATTGTAACTCCCAGGCAAAGGCCTCTTCAGCTCCTGGGAGCTTCAGAAGGTGA 921 0.4777 MDNEEIPSVPSTPATPGTPGAPLFGGFKSERTENGIGRKSLLKNCRCFGVEEWTLEDGALPRVSCSLPPPPVPLAKKVGAEFIGTFILMFAGTATAIVNQKIQGSETLIGCAAATGLAVMIIILSTGHISGAHLNPAVTVSFAALKHFPWKNVPVYIGAQVLASICAAFTLKGVFHPFMSGGVTVPSVGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNFNGVWLYLIAPILGALAGAGAYTVVKLPDEDCNSQAKASSAPGSFRR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02314 306 SUPERFAMILY Aquaporin-like 73 292 IPR023271 -
Rops4g02314 306 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Rops4g02314 306 PANTHER AQUAPORIN NIP2-1 56 294 IPR034294 -
Rops4g02314 306 FunFam Aquaporin NIP2-1 64 296 - -
Rops4g02314 306 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 MobiDBLite consensus disorder prediction 1 29 - -
Rops4g02314 306 CDD MIP 76 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 Pfam Major intrinsic protein 74 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops4g02314 306 Gene3D Glycerol uptake facilitator protein. 71 298 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02314 Rops-Chr4 50223897 50225676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02314 1 306 Major Intrinsic Protein MIP AT1G80760 76.527 2.91e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02314 K09874 - qsu:112009900 435.647