Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02307 ATGGCTAGGGATATATTGGCTATTCCGGTGTCCACTGTATCATCTGAGTCTGCATTTAGTACTGGAGGCCGTGTTCTAGACCCATATCGCAGTTCATTGAATCCTATGACAGTTGAGGCCTTAATTTGCACTCAAAACTGGTTGAGGTCCAATAAAGAGGTTGATGATGCACAAAGTCAAGCTAGTGATGCAGTAGGAGACATTGAATCAGAGCTGTCAACGATTACGGGATATGGGGAAGCTGAGGTGATTAGCATTCTTCAAAACTTGAGAGCTTCATCTCTTGAGATCTGTTTGAAGGACTTGCAGGAAGATTTTATGGGTGGAGCTAAGATTATTATTCATTCTCTTGTGTCATTCAGGGAGACTGTTCTGGAGAGATCATGCCACACTGTTAAATCAGATTACTCAGTCATTCAGAGAGTGAAATCAGATCACAGAAATGGAAGCTATTCCTCTAATGACCCTGCTGTAAGTTTCCCATTCTCTCAGAATTTGCTGCTTTGCCTATATCTGCTGCAATGTGGCTTTACAAATGCAGTTATACAAGATATCAGTTTCAGTGATGACACCATACAAATGTCTAAACAGCAGAGCCTGGTGGTTGTTGGCCCTCCAATCACACTTTCTGTAGTAAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGCACTGTAAGTGGTGCTGCTGCTGCTGAGAGGAGACTCAAATTCGCGTCGTTCAAGCAAGAATGCTTTGAAATCAAATCCAAGACAGATAAGCTAGCTGGGCTTCTCCGACAAGCGGCGAGGGCGAGCTCCGACCTCTACGAACGCCCAACACAACGCATCATAGGAGACATCGAACAGGTCCTCGACAAGGCCCTAATGTTGGTGCTCAAATGTCGTGCCAATGGTCTAATGAAGCGTGTGTTCAGCCTAGTCCCAACCGCAGCGTTTCGCAAGATGTCATCTCACCTCGAGAATTCCATCGGCGATGTGTCGTGGCTCCTCCGTGTTTCTGCTCCGGCGAAGGAGCTTGGTTATGAGTACATAGGCCTTATCTTGTTGATAGAAGGAATGGAGCCGCAGAGAGAGAACGGGAATTTTGTGAATCTGTGA 1101 0.4578 MARDILAIPVSTVSSESAFSTGGRVLDPYRSSLNPMTVEALICTQNWLRSNKEVDDAQSQASDAVGDIESELSTITGYGEAEVISILQNLRASSLEICLKDLQEDFMGGAKIIIHSLVSFRETVLERSCHTVKSDYSVIQRVKSDHRNGSYSSNDPAVSFPFSQNLLLCLYLLQCGFTNAVIQDISFSDDTIQMSKQQSLVVVGPPITLSVVSRIRNGTNGWRGTVSGAAAAERRLKFASFKQECFEIKSKTDKLAGLLRQAARASSDLYERPTQRIIGDIEQVLDKALMLVLKCRANGLMKRVFSLVPTAAFRKMSSHLENSIGDVSWLLRVSAPAKELGYEYIGLILLIEGMEPQRENGNFVNL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02307 366 SUPERFAMILY Ribonuclease H-like 1 50 IPR012337 -
Rops4g02307 366 Pfam Breast carcinoma amplified sequence 3 204 232 IPR022175 -
Rops4g02307 366 PANTHER ARMADILLO REPEAT ONLY 4 239 347 - -
Rops4g02307 366 Pfam hAT family C-terminal dimerisation region 1 48 IPR008906 GO:0046983
Rops4g02307 366 Gene3D - 236 333 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02307 Rops-Chr4 50173684 50180028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02307 95 134 Eukaryotic Initiation Factors Gene Family AT1G56070 70.732 3.96e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02307 - - mtr:11440161 173.326