Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02293 ATGGCAACTGCAGCTAAGAAAGTGTGCGTAACTGGGGCTGGAGGATTTATAGCGTCTTGGGTCATTAAGCTTCTTCTTTCCAAAGGATACATTGTCCATGGAACTGTCAGACAACCTGGTAGTCAGAAATATGAACACTTGCTGAAACTTGAGGGAGCTTCTGAGAATCTTAAACTCTTCAAGGCAGATCTGTTGAATTACGAATCTGTTCACTCAGCAATTATTGGATGCAGTGCAGTTTTCCATGTTGCTAGCCCTGTACCCTCAACAGTTGTACCCAATCCTGAGGTAGAAGTTATTGAGCCTGCAGTGAAGGGAACTTCTAATGTACTTGAAGCTTGTCTTGAAGCTAAAGTGGAACGAGTTGTCTTTGTATCATCTGTAGCTGCTATTTTCGTGAACCCCAATTTACCCAAGGATACAGTGATTAATGAGTCCTATTGGTCTGATAAAGAGTACTGCAGAAATACTAAGAACTGGTATTGTTATTCCAAGACAGAAGCAGAAGAGCAGGCCCTGGACTTTGCAAAAAGAACTGGGCTTAGTGTGGTAAGCATTTGTCCTGCCCTTGTGTGGGGGCCAATTTTACAGTCAACCATCAATTCAAGTAGCTTGGTTCTCCTCAAACTTTTAAAAGGTTGTGACTCATTGGAGAATAAGTTTCGTTGCATAGTAGATGTACGAGATCTAGCTGATGCAATACTTTTGGCTTATGAGAAGCATGAGGCAGAGGGAAGATACATATGCTTTTCACACGCTATCAAGACACGGGATTTGGTGGAGAAATTAAAGAGTATATATCCCAGTGACAAGTACCCTACGAACTATATTGAGGTGGATGATTACATGAGGTTGAGCTCAGAGAAACTGCAAAGGTTGGGTTGGAAAAGCAAGCCACTGGAGGAAACACTCATTGATTCTGCTGAGAGCTATCGAAAGGCTGGACTCCTGCAATCAGAATAA 963 0.4237 MATAAKKVCVTGAGGFIASWVIKLLLSKGYIVHGTVRQPGSQKYEHLLKLEGASENLKLFKADLLNYESVHSAIIGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTSNVLEACLEAKVERVVFVSSVAAIFVNPNLPKDTVINESYWSDKEYCRNTKNWYCYSKTEAEEQALDFAKRTGLSVVSICPALVWGPILQSTINSSSLVLLKLLKGCDSLENKFRCIVDVRDLADAILLAYEKHEAEGRYICFSHAIKTRDLVEKLKSIYPSDKYPTNYIEVDDYMRLSSEKLQRLGWKSKPLEETLIDSAESYRKAGLLQSE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02293 320 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 318 - -
Rops4g02293 320 CDD FR_SDR_e 8 295 - -
Rops4g02293 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 312 IPR036291 -
Rops4g02293 320 Gene3D - 1 320 - -
Rops4g02293 320 Pfam NAD dependent epimerase/dehydratase family 8 243 IPR001509 -
Rops4g02293 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02293 Rops-Chr4 50006885 50010581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02293 7 317 Monolignol Biosynthesis Gene Families AT2G33590 62.939 1.18e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02293 - - gmx:100784817 495.352