Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02212 ATGGAGAGCTTAAAAGCACCTTTCAGGGGAGTTGTCAATGATATTCGAGGAAGAGCACAGTGTTATAAAGATGATTGGACTTGTGCTTTCCGTTCAGGAATTGGGATATTGGCACCAACTACCTATATTTTCTTTGCTTCTGCTCTACCTGTTATTGCCTTCGGAGAGCAGCTGAATAGAGACACAGATGGAAGGTTGAGCACTGTAGAAACACTAGCTTCTACGGCCATTTGTGGAATCATACACTCAATTATTGGTGGCCAGCCGCTTCTTATTGTAGGAGTTGCAGAACCAACTATCATCATGTACACTTACTTGTACAACTTTGCCAAAGATAGGGATGGCTTGGGACAAGAACTCTTTTTGGCTTGGGCTGGATGGGTCTGTGTCTGGACTGCTCTCTTGTTGTTTCTTCTAGCAATATTCAATGCTGGTAGTATCATCCATAGATTCACAAGGGTTGCGGAAGAGCTTTTTGGCATGTTGATTACAGTTTTGTTCATTCAAGAGGCTATCAAGGGAATGATAAAGGAGTTTAGTGTTCCTAAAAATGAAAACTCAACATTAGACCAGTACCAATTTCACTGGCTCTATGTGAATGGGTTACTGGGTATTATATTCACATTTGGCCTTCTCTATACTGCATTGAAGAGCAGAAGAGCAAGATCCTGGTTATATGGCACAGGGTGGTTGAGGAGTTTTATTGCAGATTATGGGGTGCCTTTCATGGTGGTAGTGTGGACAGTTGTGTCATTCTCAGTGCCAAGTAAACTGCCATATGAAATTCCAAGAAGACTTGTTGCTCCTTTGGCTTGGGAATCTGCATCTTTACACCATTGGACAGTAGTCCAAGACATGGTAAAAGTTTCTCCAACATATATTTTTGCTGCTTTTATTCCTGCCTTGATGGTTGCAGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCGGGATGGCGCAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATATCATTATGACATATTGTTACTCGGATTCACGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGTGTTCTGCCTCAATCCCCCATGCACACCAAGAGCCTTGCAGTTCTCAAGGGTCTGATGATCCGAAGAAAGATTGTCGAAAGTGCCAAGGAAAGCATAGAAAAGAAAGCTAGCAACTCTGAAATCTATGGGAAGATACAAGCAGTGTTTGTAGAAATGGATAGCAGTCCAGTTACTTCGGTGGAAAAAGAACTAGAGAACTTGAAAGAGGTTGTTCTAAAAGGTGAAGATAAAGGAGATAATAAGAAGGATACCTTTGATCTTGAGAATATTGATGCATATCTGCCTGTTAGAGTAAATGAGCAAAGAGTGAGCAATCTTTTACAAGCACTCTTTGTTGGAGCATCAGTTTTTGCCATGCCTGTCATAAAAAAGATTCCCACTTCAGTTCTGTGGGGATACTTTGCTTACATGGCCATTGATAGTCTTCCTGGAAACCAATTCTGGGAAAGGATACTACTTCTCTTTGTAACACCTAGTAGGTGGTTCAAGTTGTTGGAGGGGGATCATGCTTCCTTTGTGGAGTCAGTACCAATCAGATACATAGCCTTCTTCACACTCTTCCAATTTGTATATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCAATAGCTGGAATCCTTTTCCCTTTGCCTTTCTTTGTATTGATCTTGGTGAGGCAGTATATCCTCCCCAAGTTGTTCAATCCTCACCATCTAATGGAACTAGATAGAGCAGAATATGAGGAAATTCCGGGTGCTCCAAGACTTCCTCTTAGTCAGATGGAATCACCTAGTTTTGGATCAAGGGAAGTGTCTGATAGTGAAATATTGGATGAATTAACTACAAGCAGAGGAGAGTTGAAGGTCAGAACTGTTAGCTTTAGAGAGGAAAGACACGGTCAGGGCTTGCAGGTCTATCCTGACGAAATAGTTTGTGAAAATGAATCCTAA 1998 0.4149 MESLKAPFRGVVNDIRGRAQCYKDDWTCAFRSGIGILAPTTYIFFASALPVIAFGEQLNRDTDGRLSTVETLASTAICGIIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKDRDGLGQELFLAWAGWVCVWTALLLFLLAIFNAGSIIHRFTRVAEELFGMLITVLFIQEAIKGMIKEFSVPKNENSTLDQYQFHWLYVNGLLGIIFTFGLLYTALKSRRARSWLYGTGWLRSFIADYGVPFMVVVWTVVSFSVPSKLPYEIPRRLVAPLAWESASLHHWTVVQDMVKVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDILLLGFTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKGLMIRRKIVESAKESIEKKASNSEIYGKIQAVFVEMDSSPVTSVEKELENLKEVVLKGEDKGDNKKDTFDLENIDAYLPVRVNEQRVSNLLQALFVGASVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWFKLLEGDHASFVESVPIRYIAFFTLFQFVYFLVCFGVTWIPIAGILFPLPFFVLILVRQYILPKLFNPHHLMELDRAEYEEIPGAPRLPLSQMESPSFGSREVSDSEILDELTTSRGELKVRTVSFREERHGQGLQVYPDEIVCENES* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02212 665 PANTHER ANION EXCHANGE PROTEIN 5 600 IPR003020 GO:0005452|GO:0006820|GO:0016020
Rops4g02212 665 FunFam probable boron transporter 2 18 60 - -
Rops4g02212 665 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016020
Rops4g02212 665 Pfam HCO3- transporter family 200 371 IPR011531 GO:0006820|GO:0016020
Rops4g02212 665 Pfam HCO3- transporter family 452 542 IPR011531 GO:0006820|GO:0016020
Rops4g02212 665 Coils Coil 413 433 - -
Rops4g02212 665 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02212 Rops-Chr4 48827591 48831045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02212 1 660 Antiporters AT1G74810 68.012 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02212 K24194 - gmx:100811184 1023.08