Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02172 ATGCCTGCTAAGGTTGCTGTCTCCAACATCCGGAGTTCTTGGGGACATCATTTACAAACTAAATCCTGGTTGCCAACAGGAATGACATTGTCAAACATGTCTTCTGCATCTAGCCTACTTTTGAGTGGGGGTCAAAATCTTCTGTTTCGTACTATCCCCATGTTACCCAGGGTGCTCAAGTCTTCTATGGCCCCTCGAGCATCGAAGGATGTCCCAACTAGCTTCCGTTATCCTCCAATGACCAAAAAACCAAGATGGTGGTGGAGAACATTAGCTTGCCTCCCTTACCTCATGCCCCTCCATGAGACATGGATGTATGCTGAGACAGCATACAATCTTCACCCATTTTTGGAAATGTTTGAATTCTATACGTACCCTTTTCTTATGGCTATTGGGAGCTTACCTAGCTGGTTTCTCATGGCATACTTCTTTGTTGCATATCTTGGAATTGTGAGGAGAAAGGAATGGCCTCATTTCTTCAGATTTCACGTTGTAATGGGAATGTTATTGGAGATAGCACTGCAGGTTATAGGGACTATAAGCCGTTGGATGCCACTATCACTCTACTGGGGTAAGCTGGGAATGCATTTCTGGACTGCTGTTTCATTTGCTTATCTCTTTACTGTCTTGGAGTCCATTAGGTGTGCTATTGTGGGTATGTATGCCGATATCCCCTTTATTTGTGACGCAGCATATATCCAAATACCATATGATTAA 717 0.4365 MPAKVAVSNIRSSWGHHLQTKSWLPTGMTLSNMSSASSLLLSGGQNLLFRTIPMLPRVLKSSMAPRASKDVPTSFRYPPMTKKPRWWWRTLACLPYLMPLHETWMYAETAYNLHPFLEMFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTISRWMPLSLYWGKLGMHFWTAVSFAYLFTVLESIRCAIVGMYADIPFICDAAYIQIPYD* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02172 238 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 4 238 IPR005691 -
Rops4g02172 238 Pfam Chloroplast import apparatus Tic20-like 62 231 IPR005691 -
Rops4g02172 238 NCBIfam Tic20 family chloroplast protein importer 1 238 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02172 Rops-Chr4 48179302 48181055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02172 30 238 Chloroplast and Mitochondria Gene Families AT4G03320 39.269 6.00e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02172 - - gmx:100818669 441.425