Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02169 ATGCCTAAGAATATTCAAAAATCCCTTCAAGATTACCTCTCCAAAATCAAAACTCCTCGCTCACAAATCCGATTGCCCTCTAAGAAATGGATCCTCTCAGGTTGCAAACATCCAAGGACTCCTTCTTTTGCCTTAGAAAACAATATCAATGGAGTTAGCAATAAGAACAACAATAAGAAGAAGGATGATGAAGCCACACTAGCAGATATAGATCGTTTTCTCTTTGAGAATTTCAAGTCTTTATACCTTGAAGACAATGAAGAAACTCATAACACCAAAAGGGTCTCTGACTCTGAAGAAGAAAGCCATGAAAAAGAACCAAAATTAGGCCCAACCTTGTTCGATTCATCCAACACTTTTGAGGAACCACCATTGGATCTTAGTGGCTCTAACCGGTTCTTCATGACACGTGGCTTCTCGGGGATGACAACAACAACAACAACAACCACTGGTGATGAAGGAGGATCAACGTCAACAGGGACAACCTCAACAACCACCACAACACTCAATGATTCATCTTCAAATTTCAATCAGACGGTTCCTGATAACTGTGTTGTGGTGTTGGCGAACTCACCGAGTCCCTACGAGGATTTCAAGAGATCCATGCAAGAAGTTGTGGAAGCAAGGTTGAGGAACAATGAAAAGGTGGATTGGGATATCATGGAAGAGCTTTTGTTTTGTTACATAAACTTGAATGAGAAAAAGTCATACAAGTTCATACTCAGTGCTTTTGTGGACTTGATCACCGTCATGCGCCGCCGTCCAGAGGCATCTCCGGCGAAGGGCCGGAGTGTGAGAACTGTTAGGATCGGAAGGGAGGTAAGGAAGAAGACTAAAGAAGTAACCCCCCACCCAATCTCTCTTTTATCTCTCTTTCTGTATCAAAGACGTGTTTGTTTGTATAACTCTGATTCTTCAGAACCATCACCCAACCCTCCTTATTCCTCACGCTTCGCTACGCCAAACATCAGGAAGATGAGCGTGGTGGGTTTCGATTTCGGTAACGAGAGCTGCATTGTCGCGGTTGCGAGGCAGAGAGGTATTGATGTTGTGCTCAATGATGAATCAAAGCGAGAAACTCCTGCTATTGTATGCTTTGGTGATAAGCAACGTTTCATTGGAACTGCTGGTGCTGCTTCCACCATGATGAACCCCAAGAATTCAATCTCACAGTTTAAGAGACTCATTGGAAGACAATTTTCTGATCCTGAATTACAGCGTGAACTCAAGTCATTTCCTTTTCTTGTCACCGAAGGACCTGATGGGTACCCTTTGATTCATGCACGTTACTTGGGTGAATCTAGAACATTTACGGCTACCCAAGTGTTTGCAATGATGTTGTCAAATCTTAAGGAAATAGCACAGAAAAATCTCAATGCTGCTGTTGTTGATTGTTGCATTGGAATCCCTGTTTATTTCACTGATCTTCAGAGAAGGGCTGTTTTGGATGCAGCCACTATTGCTGGTTTGCACCCTCTTCATTTGATTCATGAAACAACCGCAACTGCATTGGCTTATGGGATTTACAAAACGGATCTTCCTGAGAGTGATCAGCTGAATGTGGCATTTGTAGACATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTGAAAGTATTGGCTCATTCATATGATACGTCTTTGGGTGGTAGAGATTTTGACGAGGTTTTGTTCCATCATTTTGCTGCGAAATTTAAGGAGGAGTATAAGATTGACGTGTCACAGAATGCCAGGGCATGTTTAAGGCTCAGGGCCGCTTGTGAGAAGCTGAAGAAGATGCTTAGTGCAAATCCTGAGGCACCTCTCAACGTTGAGTGCTTGATGGATGATAAGGATGTCCGGAGCTTCATTAAGCGTGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCTGAAGCGGGTCTTACGGTTGAAAATGTACACATGGTTGAGGTCGTTGGTTCAGGTTCTCGTGTACCAGCTATAAACAAGATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGTTGTGCATTGCAATGTGCAATTCTTAGTCCAACGTTTAAAGTACGAGAATTTCAGGTCAACGAAAGCTTTCCTTTCTCCATTTCTCTTTCGTGGAAAGGTTCTGCTCCAGATACACAGGATACTGGACCAGATAATCAGCAAAGTTCCCTTGTTTTCCCCAAGGGTAATCCCATACCAAGTGTCAAGGTACTGACGTTTTACAGGTCAGGAACATTTTCCATTGATGTGCAATTTGCTGATGTGAGTGGGCTGCAAACACCTGCTAGGATCAGCACATATACCATTGGTCCTTTCCAAACTACACAAAGTGAAAGGGCAAAAGTTAAAGTGAAAGCTCGTTTGAATCTGCATGGAATTGTATCTGTTGAGTCGGCAACTCTGCTGGAAGAGGAAGAAATTGAGGTTCCAGTTTCAAAGGAATCAGGAAGGGAAAATACGAAGACGGACACTGATGAAGCTCCTACTGATGCTGATACACCTCCAACCTCCAATGACACTGATGTTAATATGCAAGATGCAAAGGCTAGTGCTGATACCCCTGGGGTTGAAAATGGCATTCCTGAGACTGGAGAGAAGCCTGTGCAAATGGATACTGATGATACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGGCACCTGTGGATGTCCAGAAAGCCGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGGGAAGATTTTACCACTAAACTTCAGGAGGTGGAAGATTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGAAGAACTCAAAAAGCAAGGTGATCCAGTCGAACACCGTTACAAAGAATACATGGAGAGGGGTGTGATAATTGATCAGTTCATTTATTGTATAAGGAGTTACAGAGAAGCTGCAATGTCAAATGATCCCAAATTTGATCACATTGACATCAACGAGAAACAAAAGGTTGTAAATGAATGTGTCGAAGCTGAGCACTGGTTTAGGGAGAAGAAGCAGCAGCAGGACTCGCTTCCAAAATATGCCGACCCTGTACTCTTGTCTGCTGAAATAAGAAGGAAAGCTGAGGCTGTTGATAGGTTCTGCAAGCCGATTATGGCAAAACAGAGGCCAACCAAGCCAGCTACTCCACCAACACCAGCAACCCCACCTTCTCAGGGTGGTGGTGAGCAGCAGCAACCACCTCAGGGGGATGCTAATGCCGACAACGCTAGTGAGAATGCAGGGGATAGCGGTAACCAGGTCCCACCAGCCTCTTCTGAACCAATGGAGACTGATAATAAGTCAGAGAACAATGCAGGCTCTGCCTAA 3552 0.4355 MPKNIQKSLQDYLSKIKTPRSQIRLPSKKWILSGCKHPRTPSFALENNINGVSNKNNNKKKDDEATLADIDRFLFENFKSLYLEDNEETHNTKRVSDSEEESHEKEPKLGPTLFDSSNTFEEPPLDLSGSNRFFMTRGFSGMTTTTTTTTGDEGGSTSTGTTSTTTTTLNDSSSNFNQTVPDNCVVVLANSPSPYEDFKRSMQEVVEARLRNNEKVDWDIMEELLFCYINLNEKKSYKFILSAFVDLITVMRRRPEASPAKGRSVRTVRIGREVRKKTKEVTPHPISLLSLFLYQRRVCLYNSDSSEPSPNPPYSSRFATPNIRKMSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQFKRLIGRQFSDPELQRELKSFPFLVTEGPDGYPLIHARYLGESRTFTATQVFAMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPESDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSYDTSLGGRDFDEVLFHHFAAKFKEEYKIDVSQNARACLRLRAACEKLKKMLSANPEAPLNVECLMDDKDVRSFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPDTQDTGPDNQQSSLVFPKGNPIPSVKVLTFYRSGTFSIDVQFADVSGLQTPARISTYTIGPFQTTQSERAKVKVKARLNLHGIVSVESATLLEEEEIEVPVSKESGRENTKTDTDEAPTDADTPPTSNDTDVNMQDAKASADTPGVENGIPETGEKPVQMDTDDTKVQAPKKKVKKTNIPVAELVYGAMAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASEREDFTTKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPVEHRYKEYMERGVIIDQFIYCIRSYREAAMSNDPKFDHIDINEKQKVVNECVEAEHWFREKKQQQDSLPKYADPVLLSAEIRRKAEAVDRFCKPIMAKQRPTKPATPPTPATPPSQGGGEQQQPPQGDANADNASENAGDSGNQVPPASSEPMETDNKSENNAGSA* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02169 1183 MobiDBLite consensus disorder prediction 890 904 - -
Rops4g02169 1183 FunFam Heat shock 70 kDa protein 4 363 438 - -
Rops4g02169 1183 PRINTS 70kDa heat shock protein signature 465 485 - -
Rops4g02169 1183 PRINTS 70kDa heat shock protein signature 355 367 - -
Rops4g02169 1183 PRINTS 70kDa heat shock protein signature 327 340 - -
Rops4g02169 1183 PRINTS 70kDa heat shock protein signature 688 708 - -
Rops4g02169 1183 PRINTS 70kDa heat shock protein signature 657 673 - -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 1112 1183 - -
Rops4g02169 1183 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 924 1022 IPR029048 -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 830 851 - -
Rops4g02169 1183 Gene3D - 511 685 - -
Rops4g02169 1183 NCBIfam uncharacterized plant-specific domain TIGR01568 185 250 IPR006458 -
Rops4g02169 1183 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 709 955 IPR029047 -
Rops4g02169 1183 ProSiteProfiles OVATE domain profile. 187 250 IPR006458 -
Rops4g02169 1183 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 712 919 IPR029047 -
Rops4g02169 1183 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1044 1119 IPR029048 -
Rops4g02169 1183 Gene3D Actin; Chain A, domain 4 555 638 - -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 830 904 - -
Rops4g02169 1183 Pfam Hsp70 protein 328 1022 IPR013126 GO:0005524|GO:0140662
Rops4g02169 1183 SUPERFAMILY Actin-like ATPase domain 520 705 IPR043129 -
Rops4g02169 1183 FunFam Heat shock 70 kDa protein 14 712 920 - -
Rops4g02169 1183 Gene3D - 363 438 - -
Rops4g02169 1183 Gene3D - 330 699 - -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 133 176 - -
Rops4g02169 1183 FunFam Heat shock 70 kDa protein 4 326 398 - -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 87 176 - -
Rops4g02169 1183 FunFam Heat shock 70 kDa protein 4 922 1032 - -
Rops4g02169 1183 FunFam Heat shock 70 kDa protein 4 555 638 - -
Rops4g02169 1183 SUPERFAMILY Actin-like ATPase domain 326 510 IPR043129 -
Rops4g02169 1183 PANTHER HSC70CB, ISOFORM G-RELATED 326 1173 - -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 1132 1183 - -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 852 870 - -
Rops4g02169 1183 FunFam Heat shock 70 kDa protein 4 433 528 - -
Rops4g02169 1183 CDD HSPA4_like_NDB 327 706 - -
Rops4g02169 1183 Gene3D - 924 1030 IPR029048 -
Rops4g02169 1183 MobiDBLite consensus disorder prediction 87 110 - -
Rops4g02169 1183 Pfam Transcriptional repressor, ovate 191 249 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02169 Rops-Chr4 48137053 48148257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02169 329 731 Calmodulin-binding Proteins AT1G16030 36.207 2.24e-83 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops4g02169 HSP70 3.8e-161 CL0108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02169 K09489 - gmx:100780156 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02169 4 48137053 48148257 Rops4g02169 4 48137053 48148257 ECH
Rops7g00200 7 2788674 2793875 Rops4g02169 4 48137053 48148257 PCT