Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops4g02169 | ATGCCTAAGAATATTCAAAAATCCCTTCAAGATTACCTCTCCAAAATCAAAACTCCTCGCTCACAAATCCGATTGCCCTCTAAGAAATGGATCCTCTCAGGTTGCAAACATCCAAGGACTCCTTCTTTTGCCTTAGAAAACAATATCAATGGAGTTAGCAATAAGAACAACAATAAGAAGAAGGATGATGAAGCCACACTAGCAGATATAGATCGTTTTCTCTTTGAGAATTTCAAGTCTTTATACCTTGAAGACAATGAAGAAACTCATAACACCAAAAGGGTCTCTGACTCTGAAGAAGAAAGCCATGAAAAAGAACCAAAATTAGGCCCAACCTTGTTCGATTCATCCAACACTTTTGAGGAACCACCATTGGATCTTAGTGGCTCTAACCGGTTCTTCATGACACGTGGCTTCTCGGGGATGACAACAACAACAACAACAACCACTGGTGATGAAGGAGGATCAACGTCAACAGGGACAACCTCAACAACCACCACAACACTCAATGATTCATCTTCAAATTTCAATCAGACGGTTCCTGATAACTGTGTTGTGGTGTTGGCGAACTCACCGAGTCCCTACGAGGATTTCAAGAGATCCATGCAAGAAGTTGTGGAAGCAAGGTTGAGGAACAATGAAAAGGTGGATTGGGATATCATGGAAGAGCTTTTGTTTTGTTACATAAACTTGAATGAGAAAAAGTCATACAAGTTCATACTCAGTGCTTTTGTGGACTTGATCACCGTCATGCGCCGCCGTCCAGAGGCATCTCCGGCGAAGGGCCGGAGTGTGAGAACTGTTAGGATCGGAAGGGAGGTAAGGAAGAAGACTAAAGAAGTAACCCCCCACCCAATCTCTCTTTTATCTCTCTTTCTGTATCAAAGACGTGTTTGTTTGTATAACTCTGATTCTTCAGAACCATCACCCAACCCTCCTTATTCCTCACGCTTCGCTACGCCAAACATCAGGAAGATGAGCGTGGTGGGTTTCGATTTCGGTAACGAGAGCTGCATTGTCGCGGTTGCGAGGCAGAGAGGTATTGATGTTGTGCTCAATGATGAATCAAAGCGAGAAACTCCTGCTATTGTATGCTTTGGTGATAAGCAACGTTTCATTGGAACTGCTGGTGCTGCTTCCACCATGATGAACCCCAAGAATTCAATCTCACAGTTTAAGAGACTCATTGGAAGACAATTTTCTGATCCTGAATTACAGCGTGAACTCAAGTCATTTCCTTTTCTTGTCACCGAAGGACCTGATGGGTACCCTTTGATTCATGCACGTTACTTGGGTGAATCTAGAACATTTACGGCTACCCAAGTGTTTGCAATGATGTTGTCAAATCTTAAGGAAATAGCACAGAAAAATCTCAATGCTGCTGTTGTTGATTGTTGCATTGGAATCCCTGTTTATTTCACTGATCTTCAGAGAAGGGCTGTTTTGGATGCAGCCACTATTGCTGGTTTGCACCCTCTTCATTTGATTCATGAAACAACCGCAACTGCATTGGCTTATGGGATTTACAAAACGGATCTTCCTGAGAGTGATCAGCTGAATGTGGCATTTGTAGACATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTGAAAGTATTGGCTCATTCATATGATACGTCTTTGGGTGGTAGAGATTTTGACGAGGTTTTGTTCCATCATTTTGCTGCGAAATTTAAGGAGGAGTATAAGATTGACGTGTCACAGAATGCCAGGGCATGTTTAAGGCTCAGGGCCGCTTGTGAGAAGCTGAAGAAGATGCTTAGTGCAAATCCTGAGGCACCTCTCAACGTTGAGTGCTTGATGGATGATAAGGATGTCCGGAGCTTCATTAAGCGTGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTTTGGAGAAGGCACTTGCTGAAGCGGGTCTTACGGTTGAAAATGTACACATGGTTGAGGTCGTTGGTTCAGGTTCTCGTGTACCAGCTATAAACAAGATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGTTGTGCATTGCAATGTGCAATTCTTAGTCCAACGTTTAAAGTACGAGAATTTCAGGTCAACGAAAGCTTTCCTTTCTCCATTTCTCTTTCGTGGAAAGGTTCTGCTCCAGATACACAGGATACTGGACCAGATAATCAGCAAAGTTCCCTTGTTTTCCCCAAGGGTAATCCCATACCAAGTGTCAAGGTACTGACGTTTTACAGGTCAGGAACATTTTCCATTGATGTGCAATTTGCTGATGTGAGTGGGCTGCAAACACCTGCTAGGATCAGCACATATACCATTGGTCCTTTCCAAACTACACAAAGTGAAAGGGCAAAAGTTAAAGTGAAAGCTCGTTTGAATCTGCATGGAATTGTATCTGTTGAGTCGGCAACTCTGCTGGAAGAGGAAGAAATTGAGGTTCCAGTTTCAAAGGAATCAGGAAGGGAAAATACGAAGACGGACACTGATGAAGCTCCTACTGATGCTGATACACCTCCAACCTCCAATGACACTGATGTTAATATGCAAGATGCAAAGGCTAGTGCTGATACCCCTGGGGTTGAAAATGGCATTCCTGAGACTGGAGAGAAGCCTGTGCAAATGGATACTGATGATACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGGCACCTGTGGATGTCCAGAAAGCCGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGGGAAGATTTTACCACTAAACTTCAGGAGGTGGAAGATTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGAAGAACTCAAAAAGCAAGGTGATCCAGTCGAACACCGTTACAAAGAATACATGGAGAGGGGTGTGATAATTGATCAGTTCATTTATTGTATAAGGAGTTACAGAGAAGCTGCAATGTCAAATGATCCCAAATTTGATCACATTGACATCAACGAGAAACAAAAGGTTGTAAATGAATGTGTCGAAGCTGAGCACTGGTTTAGGGAGAAGAAGCAGCAGCAGGACTCGCTTCCAAAATATGCCGACCCTGTACTCTTGTCTGCTGAAATAAGAAGGAAAGCTGAGGCTGTTGATAGGTTCTGCAAGCCGATTATGGCAAAACAGAGGCCAACCAAGCCAGCTACTCCACCAACACCAGCAACCCCACCTTCTCAGGGTGGTGGTGAGCAGCAGCAACCACCTCAGGGGGATGCTAATGCCGACAACGCTAGTGAGAATGCAGGGGATAGCGGTAACCAGGTCCCACCAGCCTCTTCTGAACCAATGGAGACTGATAATAAGTCAGAGAACAATGCAGGCTCTGCCTAA | 3552 | 0.4355 | MPKNIQKSLQDYLSKIKTPRSQIRLPSKKWILSGCKHPRTPSFALENNINGVSNKNNNKKKDDEATLADIDRFLFENFKSLYLEDNEETHNTKRVSDSEEESHEKEPKLGPTLFDSSNTFEEPPLDLSGSNRFFMTRGFSGMTTTTTTTTGDEGGSTSTGTTSTTTTTLNDSSSNFNQTVPDNCVVVLANSPSPYEDFKRSMQEVVEARLRNNEKVDWDIMEELLFCYINLNEKKSYKFILSAFVDLITVMRRRPEASPAKGRSVRTVRIGREVRKKTKEVTPHPISLLSLFLYQRRVCLYNSDSSEPSPNPPYSSRFATPNIRKMSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQFKRLIGRQFSDPELQRELKSFPFLVTEGPDGYPLIHARYLGESRTFTATQVFAMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPESDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSYDTSLGGRDFDEVLFHHFAAKFKEEYKIDVSQNARACLRLRAACEKLKKMLSANPEAPLNVECLMDDKDVRSFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPDTQDTGPDNQQSSLVFPKGNPIPSVKVLTFYRSGTFSIDVQFADVSGLQTPARISTYTIGPFQTTQSERAKVKVKARLNLHGIVSVESATLLEEEEIEVPVSKESGRENTKTDTDEAPTDADTPPTSNDTDVNMQDAKASADTPGVENGIPETGEKPVQMDTDDTKVQAPKKKVKKTNIPVAELVYGAMAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASEREDFTTKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPVEHRYKEYMERGVIIDQFIYCIRSYREAAMSNDPKFDHIDINEKQKVVNECVEAEHWFREKKQQQDSLPKYADPVLLSAEIRRKAEAVDRFCKPIMAKQRPTKPATPPTPATPPSQGGGEQQQPPQGDANADNASENAGDSGNQVPPASSEPMETDNKSENNAGSA* | 1184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 890 | 904 | - | - | |
Rops4g02169 | 1183 | FunFam | Heat shock 70 kDa protein 4 | 363 | 438 | - | - | |
Rops4g02169 | 1183 | PRINTS | 70kDa heat shock protein signature | 465 | 485 | - | - | |
Rops4g02169 | 1183 | PRINTS | 70kDa heat shock protein signature | 355 | 367 | - | - | |
Rops4g02169 | 1183 | PRINTS | 70kDa heat shock protein signature | 327 | 340 | - | - | |
Rops4g02169 | 1183 | PRINTS | 70kDa heat shock protein signature | 688 | 708 | - | - | |
Rops4g02169 | 1183 | PRINTS | 70kDa heat shock protein signature | 657 | 673 | - | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 1112 | 1183 | - | - | |
Rops4g02169 | 1183 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 924 | 1022 | IPR029048 | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 830 | 851 | - | - | |
Rops4g02169 | 1183 | Gene3D | - | 511 | 685 | - | - | |
Rops4g02169 | 1183 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 185 | 250 | IPR006458 | - | |
Rops4g02169 | 1183 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 709 | 955 | IPR029047 | - | |
Rops4g02169 | 1183 | ProSiteProfiles | OVATE domain profile. | 187 | 250 | IPR006458 | - | |
Rops4g02169 | 1183 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 712 | 919 | IPR029047 | - | |
Rops4g02169 | 1183 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 1044 | 1119 | IPR029048 | - | |
Rops4g02169 | 1183 | Gene3D | Actin; Chain A, domain 4 | 555 | 638 | - | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 830 | 904 | - | - | |
Rops4g02169 | 1183 | Pfam | Hsp70 protein | 328 | 1022 | IPR013126 | GO:0005524|GO:0140662 | |
Rops4g02169 | 1183 | SUPERFAMILY | Actin-like ATPase domain | 520 | 705 | IPR043129 | - | |
Rops4g02169 | 1183 | FunFam | Heat shock 70 kDa protein 14 | 712 | 920 | - | - | |
Rops4g02169 | 1183 | Gene3D | - | 363 | 438 | - | - | |
Rops4g02169 | 1183 | Gene3D | - | 330 | 699 | - | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 133 | 176 | - | - | |
Rops4g02169 | 1183 | FunFam | Heat shock 70 kDa protein 4 | 326 | 398 | - | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 87 | 176 | - | - | |
Rops4g02169 | 1183 | FunFam | Heat shock 70 kDa protein 4 | 922 | 1032 | - | - | |
Rops4g02169 | 1183 | FunFam | Heat shock 70 kDa protein 4 | 555 | 638 | - | - | |
Rops4g02169 | 1183 | SUPERFAMILY | Actin-like ATPase domain | 326 | 510 | IPR043129 | - | |
Rops4g02169 | 1183 | PANTHER | HSC70CB, ISOFORM G-RELATED | 326 | 1173 | - | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 1132 | 1183 | - | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 852 | 870 | - | - | |
Rops4g02169 | 1183 | FunFam | Heat shock 70 kDa protein 4 | 433 | 528 | - | - | |
Rops4g02169 | 1183 | CDD | HSPA4_like_NDB | 327 | 706 | - | - | |
Rops4g02169 | 1183 | Gene3D | - | 924 | 1030 | IPR029048 | - | |
Rops4g02169 | 1183 | MobiDBLite | consensus disorder prediction | 87 | 110 | - | - | |
Rops4g02169 | 1183 | Pfam | Transcriptional repressor, ovate | 191 | 249 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops4g02169 | Rops-Chr4 | 48137053 | 48148257 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops4g02169 | 329 | 731 | Calmodulin-binding Proteins | AT1G16030 | 36.207 | 2.24e-83 | 284 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Rops4g02169 | HSP70 | 3.8e-161 | CL0108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops4g02169 | K09489 | - | gmx:100780156 | 1405.19 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops4g02169 | 4 | 48137053 | 48148257 | Rops4g02169 | 4 | 48137053 | 48148257 | ECH | |
Rops7g00200 | 7 | 2788674 | 2793875 | Rops4g02169 | 4 | 48137053 | 48148257 | PCT |