Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02158 ATGAACCGGCAAGGGCAAAGATCCGGTGCGACGAGGGTGCACCACCACCGTCAGTGTTCCTCCGACAACTTTCTCGACGCTTCCTCCAAATGGCTTCTTCATTCCTCCTCCAATCCAATTCCTCCTCTTCAGGACTACAACGTGTACGGTGGGGAAGGTAGAATGTATAGGAATTCGCAGAGAAGCTTCAACGAGTGTTATTTTGATCCCTCCACCACACCTCTTGGTAATTACAAAAACGGCGATGAACAAGAAGATTCACCTCTTGATTTCAGCCCTGGCCTATTGGATCTTCATTCATTTGATACAGACCTTCTTCCTCAGATGCCGGCTTCCAAAGTACAGGATGCCACCATCCTGTATCAACCTACCCGTGGTGGTAGAAACTTTGATGATTCTGAACCTTACATTTCAGTCAAACAGGTTGCCAGACCTCGTGCACCTGAAAACAATGTCTTCAATAATCTTTCTGCAGACAATGTGAAACCTAGTCCTGTAGCAAAGATTAAAGTTGTGGTTCGCAAGAGACCACTTAATAAGAAGGAATTAGCAAAGCATGAGGAAGATATTATAGAGACAGTTTCAAATTCTTTAACAGTGCATGAGACAAAACTTAAGGTTGACCTAACTCAGTATTTAGAGAAGCACGAATTTGTTTTTGATGCTGTCTTGAATGGGGAGGTTACAAATGATGAGGTGTACCGTGAAACGGTGGAGCCCTTAGTTCCATTGATCTTTCAACGCACTAAGGCTACTTGCTTTGCATATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCAAGAGACATCTTGAGATTGATGTATCATACCTACAGGAACCAGGGATTTCAGTTGTTTGTGGGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTCAATGATCGAAAAAAACTATGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTCGGTTTGCAAGAATACCGAGTATCGGATGTAGATACCATCAAGGAGCTGATTGAACAAGGAAATGCCACTAGAAGCACTGGCACCACAGGTGCAAATGAGGAATCCTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAAAGTTGATGGAAATGGATCCAAGCCTTCCCGTGCAGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTCGCTCTAAAGGAATGCATAAGAGCTCTTGATAACGACCAAGGACACATCCCTTTCAGAGGCAGTAAATTGACTGAAGTTCTAAGGGATTCATTTGTTGGTGATTCCCGCACTGTTATGATATCATGCATATCACCAAGCTCTGGTTCATGTGAACATACTCTTAATACATTAAGATATGCTGACAGGGTAAAAAGCCTATCAAAAGGGAACAATTCTAAGAAGGATGTTTTATCTTCAAATTTCAACCTTAAAGAATCAAATACTGTTCCCTTATCTACGGGTACCACTTATGCCTATGAGGATCGTATAGCTGAATCATGGCCTGAAGAAGACGATGTGGATGATTTTAGTCCTCCTGAAGATTACTATGAGGAGGTGAAACCATCATGGAAGAAAAATGGAAAAATAGATCCATATGGTGCGACAGATGACAAATTGAAGAAACCCAATGGTCATATCAAATGGAAAGACCTCCCAAAAGGTGAAACTAAAACAGTACATTCAGATGATGATTTAAATGCCCTGTTACAGGAAGAAGAAGACCTCATAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATCTTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTGGATGATTATATAACAAAACTAAATGCCATTTTATCTCAGAAGGCTGCTGGCATCATGCAGTTACAAACTCGTTTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAATGTTTTCGTTTCATCTGCTGGTTACTGA 2049 0.4168 MNRQGQRSGATRVHHHRQCSSDNFLDASSKWLLHSSSNPIPPLQDYNVYGGEGRMYRNSQRSFNECYFDPSTTPLGNYKNGDEQEDSPLDFSPGLLDLHSFDTDLLPQMPASKVQDATILYQPTRGGRNFDDSEPYISVKQVARPRAPENNVFNNLSADNVKPSPVAKIKVVVRKRPLNKKELAKHEEDIIETVSNSLTVHETKLKVDLTQYLEKHEFVFDAVLNGEVTNDEVYRETVEPLVPLIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMYHTYRNQGFQLFVGFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVDTIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKKVDGNGSKPSRAVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESNTVPLSTGTTYAYEDRIAESWPEEDDVDDFSPPEDYYEEVKPSWKKNGKIDPYGATDDKLKKPNGHIKWKDLPKGETKTVHSDDDLNALLQEEEDLINAHRKQVEETMNLVREEMNLLVEADQPGNQLDDYITKLNAILSQKAAGIMQLQTRLAHFQKRLKEHNVFVSSAGY* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02158 682 PANTHER KINESIN-RELATED PROTEIN 6 71 517 IPR027640 GO:0003777|GO:0007018
Rops4g02158 682 MobiDBLite consensus disorder prediction 532 552 - -
Rops4g02158 682 Pfam Kinesin motor domain 174 489 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g02158 682 Gene3D Kinesin motor domain 147 493 IPR036961 -
Rops4g02158 682 SMART kinesin_4 166 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g02158 682 ProSitePatterns Kinesin motor domain signature. 389 400 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops4g02158 682 Coils Coil 600 631 - -
Rops4g02158 682 CDD KISc_KIF2_like 168 488 - -
Rops4g02158 682 ProSiteProfiles Kinesin motor domain profile. 168 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g02158 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 490 IPR027417 -
Rops4g02158 682 FunFam Kinesin-like protein 149 493 - -
Rops4g02158 682 PRINTS Kinesin heavy chain signature 357 374 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g02158 682 PRINTS Kinesin heavy chain signature 390 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g02158 682 PRINTS Kinesin heavy chain signature 440 461 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g02158 682 PRINTS Kinesin heavy chain signature 248 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02158 Rops-Chr4 48017783 48023179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02158 167 490 Calmodulin-binding Proteins AT5G65930 33.533 3.81e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02158 K10393 - gmx:100802651 1113.98