Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02157 ATGGCAACTTTGATATTGCCCAAGATGAGCTTAGTGATGCTTGTGTTGTGCCTTTTGCTCTCTTTCGATGATCACAAGCACAAGCACACCAACCACCCCAACACATTGAACACCTTTCCTTTACATTCCTTTTCCAATGGCCCTGTCTCTTTATCTGTCAAGAACAAGAACCTTGATTCTTCTTCTCAGTCCCTCCTTGAATATGATTTCTACCGCAGTTCCTGCCCCCAAGCAGAGCACATTGTTCGAGCTACAATTCACCATATTCACCGTACTACACCCAGTTTGGTTCCTGCTCTCATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCTGTTTTGTTAGATGATGATGATTACATTGATTCAGAGAAAGAGTCACCTCCCAATGGAAGTCTCAAAGGTTTTGAAGTAATTGAGACCATCAAATCCAAGCTTGAAGAAGCATGCCCTGGGGTTGTTTCTTGTGCTGATATTCTTGTACTGGCAGCAAGAGACTCTGTGGTTCTGGCTGGTGGCCCATTCTATCCTTTATATACCGGCAGGAGAGATGGTTCTAACTCTTTTGCTGACATTGCCACATACGAGCTTCCTTCACCCTATGGTGATTTATCCCAAACACTTGCATCCTTCAAATCAAGGGGATTCAATGAAAGAGAGATGGTCACTCTTTTAGGTGCACATAGCATTGGGGTGATACACTGTGAATTCTTTGAGAACCGTCTCTATAACTTCAATGGAACTAATGAACCTGACCCTTCTCTAGATAGCGAGTTTCTAAATCTACTAAGATCAAGATGCAATCACTGTGATGCATCATCCTCTTCAGCATCAGGATATACTTCCCATGGCTCAAATTCATCTATAGTATCAAATTCACCTTCTTCCTTAGTCGAAGAGCCAGGAATGATTATGGACTTTGAGCAACCTCGATCAGATTTTGGGACGCCATACTACCGCAGCCTATTGCATGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGGAAGGGGAAATAACAAAGAATTGGGTCAAAGAATATGCATTTAATCCTACGTTGTTCCATCAAGATTTTGCCCTTGCAATGATGAAACTCTCAGATCTCCAGGTTTTGACACTGCCTATGGGACAGATTCGGCTCAATTGTTCAAAGGTTGCATGA 1176 0.426 MATLILPKMSLVMLVLCLLLSFDDHKHKHTNHPNTLNTFPLHSFSNGPVSLSVKNKNLDSSSQSLLEYDFYRSSCPQAEHIVRATIHHIHRTTPSLVPALIRLAFHDCFIQGCDASVLLDDDDYIDSEKESPPNGSLKGFEVIETIKSKLEEACPGVVSCADILVLAARDSVVLAGGPFYPLYTGRRDGSNSFADIATYELPSPYGDLSQTLASFKSRGFNEREMVTLLGAHSIGVIHCEFFENRLYNFNGTNEPDPSLDSEFLNLLRSRCNHCDASSSSASGYTSHGSNSSIVSNSPSSLVEEPGMIMDFEQPRSDFGTPYYRSLLHGKGILYADQQLMEGEITKNWVKEYAFNPTLFHQDFALAMMKLSDLQVLTLPMGQIRLNCSKVA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02157 391 Gene3D - 66 206 - -
Rops4g02157 391 CDD secretory_peroxidase 66 390 IPR033905 GO:0004601|GO:0042744
Rops4g02157 391 PRINTS Plant peroxidase signature 176 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 75 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 99 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 138 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 325 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 365 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 157 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Plant peroxidase signature 223 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 MobiDBLite consensus disorder prediction 279 299 - -
Rops4g02157 391 ProSitePatterns Peroxidases active site signature. 97 108 IPR019794 GO:0004601
Rops4g02157 391 ProSiteProfiles Plant heme peroxidase family profile. 65 391 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PANTHER PEROXIDASE 25-RELATED 19 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 FunFam Peroxidase 69 211 - -
Rops4g02157 391 SUPERFAMILY Heme-dependent peroxidases 66 390 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 ProSitePatterns Peroxidases proximal heme-ligand signature. 224 234 IPR019793 -
Rops4g02157 391 Pfam Peroxidase 82 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 Gene3D Peroxidase, domain 2 207 370 - -
Rops4g02157 391 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Haem peroxidase superfamily signature 158 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Haem peroxidase superfamily signature 176 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g02157 391 PRINTS Haem peroxidase superfamily signature 97 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02157 Rops-Chr4 48015176 48017147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02157 63 390 Peroxidase AT4G33870 52.226 5.96e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02157 K00430 - mof:131158483 457.603