Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02086 ATGATGAACATCAATAGCAAAGAAGCACTTGTCCTACTCTTAGCATTAGTCTTTTTGACTTGTGGGTATGCACAAGATGCCACCCTTGTGCCAGCAATCATAACATTTGGTGACTCTGCTGTGGATGTAGGGAATAATGACTATCTTCCCACTCTTTTCAAGGCTAATTACCCTCCTTATGGGAGGGACTTTGTTAACCGCCAACCTACTGGGAGGTTTTGCAATGGGAAATTAGCTACTGATATTACTGCTGAAACACTGGGTTTTAAGAGCTATGCACCTGCATATCTTAGCCCACAGGCATCAGGGAAGAACCTCCTTATTGGAGCAAACTTTGCATCAGCTGCATCTGGTTATGATGAAAAGGCTGCTGTTTTGAATCATGCAATCCCATTATCTAAACAGTTAAATTATTACAAGGAATATCAAAGCAAGCTGGCTAAGGTAGCTGGCAGTAAAAAAGCAGCCTCAATTATCAAGGATTCATTGTACTTATTGAGTGCTGGCAGCAGTGACTTTGTGCAAAATTATTATGTCAATCCTTTGATCAACAAAGCCTTGACTCCTGATCAGTACTCATCGTACTTAGTGGGTTCATTCTCAAGCTTTATTAAGGACTTGTATGGATTGGGAGCCAGGAAAATTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCTCAAGGATTTAACAAGAAGATCAACTCAGCTGCAGCAAATCTTCAAAAGCAACTTCCTGGTCTTAAGATTGTAGTTTTTGATATTTTCAAGCCTCTCTATGACCTTGTTCAGTCCCCTTCAAAATCTGGTTTCAAGGAGGCAAGAAGAGGGTGCTGTGGTACAGGGACTGTAGAGACAACATCCTTGTTGTGCAATCAAATATCAGTAGGAACTTGTTCCAATGCAACCCAGTATGTATTTTGGGACAGTGTCCATCCTTCACAAGCTGCAAACCAAGTTCTAGCTGATGCGTTGATTTTACAAGGCATAGCTCTTATTTCATGA 1068 0.4148 MMNINSKEALVLLLALVFLTCGYAQDATLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNRQPTGRFCNGKLATDITAETLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAVLNHAIPLSKQLNYYKEYQSKLAKVAGSKKAASIIKDSLYLLSAGSSDFVQNYYVNPLINKALTPDQYSSYLVGSFSSFIKDLYGLGARKIGVTSLPPLGCLPAARTLFGFHENGCVSRINTDAQGFNKKINSAAANLQKQLPGLKIVVFDIFKPLYDLVQSPSKSGFKEARRGCCGTGTVETTSLLCNQISVGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02086 355 PANTHER GDSL ESTERASE/LIPASE EXL3 17 346 - -
Rops4g02086 355 SUPERFAMILY SGNH hydrolase 33 346 - -
Rops4g02086 355 FunFam GDSL esterase/lipase APG 23 351 - -
Rops4g02086 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Rops4g02086 355 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Rops4g02086 355 Gene3D SGNH hydrolase 22 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02086 Rops-Chr4 47215317 47216936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02086 6 347 Pollen Coat Proteome AT1G75910 35.362 5.53e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02086 - - gmx:100815273 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02086 4 47215317 47216936 Rops4g02086 4 47215317 47216936 ECH