Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02082 ATGCACAAGCTGAGGCTCACACAGGACGAAGTGCTTTTATCACTGACCATAATTTGTGTGAAGTTGGATATATATGATATATGCAAGATTTTGGGTAACATGGATAGGGAACCACGATTGATTGTCACCTTAATGTTAAAAGTATGTGTATGGCTTGCCTTGCTTCCACTTTTCATTTTTCATGCCAATTCAGCAGGACTAGACAAACCTGTTGCAAGAGAAATTGCTAACGATAAAAATCCAGGTTTCATAAGCATTGATTGTGGATCAGCCATAAATTACAAGGACGATGATTCTGAAATTTGGTATCAGACAGATGAAGGTTTTGTGGAAACAGGAACGAATAAAGGGATTTCATCCGCTAAAGACTTAAATTATGACAACTTTGGGAGACAGTTGAACACATTGAGATACTTTCCAAAAGGAGACAGGAACTGTTACATCTTGAGACCAGAACAAGGCAAAAATAATAGGTATCTCATAAGGGCTTTCTTTGCATATGGAAATTATGACGGCCAAAATCAAACCCAATCTTTTGACCTATATCTTGGAGTCAATCTTTGGGAAAAACTTAATTTTAGTGTCCACACTGATTACGAATTCAGGGAGATAATTCACACTCTCTCAACAGACAGCATAGATGTGTGCCTTGTAAAGACTGGTTCAACATTCCCTTACATTTCTTCATTGGAATTACGACTTTTGAACAGTTCCATTTATCAGAATCAAATCATGTCAACCAGTGGTCCGCAACCAATGTTACGTCTTGATAGTAGGATTGATGTTGGCTCCCCTCAATCGCCTGCGCCTGATGATAACGATTTCTTCAGGTACAGAGATGACGCGTATGATCGTATATGGCGGTACGACCCAAAGTACGATGACAGTGGTTGGTATCCGTTGCGAGAAGCGATTCATATTGATCCTGGAAGTAGTGGCGATGCTTATAAATTGCCAACCGAAGTATTGACGAGTGCAGCCCAATCACCGAATCTTTCTTCCCCCTTAGAATTTGACCCTGACGATGAGTTTATTGATGATCTTGAGAGGCCTTCTGAGTATCAAGTTTACTTCCACTTTGCTGAAATTGAGAAGCTTCCTGATGGGGGAAATAGGACAATTGATATCACCCTCAATTCCAAAAAAGTTCTCCCACATCCTTTGGTTCTTGAATACTTGAAGCCTGTTAGTCATGTATTCAAAACTAAAGGTCGTGTTAACTTTAGCATTAGTGCGACATCACAATCGGCTGCTCCCCCTATCCTCAACGCTCTTGAGATCTATAAGTTAATGACACAACTTGATTCCCCAACAGACACTCGAGATGTTGGTGCTATTATGGATATCAAAAGTGCCTACCAGATCTCTAAATTGAGTTGGCAAGGAGACCCGTGTCTTCCAAACCAATATAAATGGGAGGGTCTCAATTGCACCTCTGACACCAATCCAAGGATCACATCTTTGGACTTGAGCTCGAGCAAACTCACAGGGGAGATAAATACTTCATTCTCATATCTTACAGAATTAGAATCCCTGGATTTGTCACACAACGAGTTGGAAGGAGCTGTGCCGGAATTTCTGGCAGATTTGCGAAAGTTAAGAGTTCTAAATCTGACAGGGAACAAGCTTTCGGGTCCAATTCCTAAGGCTCTCATGGAAAAGGCAAATATAAGTTTGCAATTAAGTGTGGCTGATAATCTTGATCTCTGTATGGATTCATGCAAAAAGAACAACTTTGTTATACCACTTGTTGCATCACTTTCAGCTTTAATTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTCAGAAGACAAAAAGTTGTGCATTCTTATTCTAAGAAGGGGGATTCACTAACATCAAAACATCGAGCTTTCAATTACACCGAGATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCATTTTACAAGATGACACACAAGTTGCTGTTAAGTTACTTTCACAATCGTCAATGCAAGGTTATAAAGAATTCCGATCAGAGGCACAACTTCTAATGACTGTTCATCATAGAAATTTGGTCTCTCTTATTGGGTATTGCGATGAAGGTGAAATTAAGGCGTTGATTTATGAATACATGGCCAATGGAAATCTCCTACAACATTTATCAGTGGAAAATCTAAATGTCTTAAAGTGGAACGAGAGACTCAATATTGCCGTTGATGCAGCACAGGGAATAGATTATCTGCATAATGGTTGTAAACCACCTCTTGTCCATAGAGATTTGAAGACTCCCAACATATTACTAGATGAGAACATGCATGCCAAGATAGCTGATTTTGGTCTATGTAGAGCTTTTGGTAATGATATTGATTCTCATGTATCGACTCGCCCTGCTGGTACCCTGGGTTATGTTGATCCAGAATTTCAGAGAACTGGAAACTCAAATAAGAAAAGTGATATCTACAGCTTTGGGATAATTCTATTTGAGTTAATCACTGGCCAACAAGTACTAGCAAGATCACATGGAAAAAACATTCACATACTTCAACGGGTTATTCCCATCGTTAAAAGAGGAGATATTCAAAACGTTGTTGATCCGAGGTTGAAAGAAGAATTCAGTGTCAATTCAGCATGGAAAGCTGTAGAGATTGCCATGTCATGCACTTCACCAACTGCTGCTGAAAGGCCAGACATGAGCCAAATATTGGTAGAGCTAAAGGAATGTCTATCTTTAGAGATGGTTCATAGAATTGGTGAAAGAGAAAGAACTACAATTGAATTGACTTCTTTGCAGATTGAATCAGAAATTGCTCCCTTAGCTAGGTAG 2826 0.3917 MHKLRLTQDEVLLSLTIICVKLDIYDICKILGNMDREPRLIVTLMLKVCVWLALLPLFIFHANSAGLDKPVAREIANDKNPGFISIDCGSAINYKDDDSEIWYQTDEGFVETGTNKGISSAKDLNYDNFGRQLNTLRYFPKGDRNCYILRPEQGKNNRYLIRAFFAYGNYDGQNQTQSFDLYLGVNLWEKLNFSVHTDYEFREIIHTLSTDSIDVCLVKTGSTFPYISSLELRLLNSSIYQNQIMSTSGPQPMLRLDSRIDVGSPQSPAPDDNDFFRYRDDAYDRIWRYDPKYDDSGWYPLREAIHIDPGSSGDAYKLPTEVLTSAAQSPNLSSPLEFDPDDEFIDDLERPSEYQVYFHFAEIEKLPDGGNRTIDITLNSKKVLPHPLVLEYLKPVSHVFKTKGRVNFSISATSQSAAPPILNALEIYKLMTQLDSPTDTRDVGAIMDIKSAYQISKLSWQGDPCLPNQYKWEGLNCTSDTNPRITSLDLSSSKLTGEINTSFSYLTELESLDLSHNELEGAVPEFLADLRKLRVLNLTGNKLSGPIPKALMEKANISLQLSVADNLDLCMDSCKKNNFVIPLVASLSALIVILLISLGFWIFRRQKVVHSYSKKGDSLTSKHRAFNYTEILNITDNFKTIIGEGGFGKVYFGILQDDTQVAVKLLSQSSMQGYKEFRSEAQLLMTVHHRNLVSLIGYCDEGEIKALIYEYMANGNLLQHLSVENLNVLKWNERLNIAVDAAQGIDYLHNGCKPPLVHRDLKTPNILLDENMHAKIADFGLCRAFGNDIDSHVSTRPAGTLGYVDPEFQRTGNSNKKSDIYSFGIILFELITGQQVLARSHGKNIHILQRVIPIVKRGDIQNVVDPRLKEEFSVNSAWKAVEIAMSCTSPTAAERPDMSQILVELKECLSLEMVHRIGERERTTIELTSLQIESEIAPLAR* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02082 941 Gene3D Ribonuclease Inhibitor 444 565 IPR032675 -
Rops4g02082 941 Pfam Leucine rich repeat 483 543 IPR001611 GO:0005515
Rops4g02082 941 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Rops4g02082 941 SUPERFAMILY Protein kinase-like (PK-like) 620 905 IPR011009 -
Rops4g02082 941 PANTHER OS07G0107800 PROTEIN-RELATED 84 909 - -
Rops4g02082 941 Gene3D Phosphorylase Kinase; domain 1 618 711 - -
Rops4g02082 941 FunFam Leucine-rich repeat receptor-like kinase 441 572 - -
Rops4g02082 941 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 712 917 - -
Rops4g02082 941 PRINTS Leucine-rich repeat signature 509 522 - -
Rops4g02082 941 PRINTS Leucine-rich repeat signature 530 543 - -
Rops4g02082 941 ProSiteProfiles Protein kinase domain profile. 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02082 941 Gene3D Transferase(Phosphotransferase) domain 1 712 927 - -
Rops4g02082 941 CDD STKc_IRAK 642 907 - -
Rops4g02082 941 Gene3D - 258 431 - -
Rops4g02082 941 SMART serkin_6 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02082 941 Pfam Protein tyrosine and serine/threonine kinase 638 904 IPR001245 GO:0004672|GO:0006468
Rops4g02082 941 Pfam Malectin-like domain 86 429 IPR024788 -
Rops4g02082 941 SUPERFAMILY L domain-like 467 557 - -
Rops4g02082 941 FunFam Leucine-rich repeat receptor-like protein kinase 614 711 - -
Rops4g02082 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02082 Rops-Chr4 47180528 47190190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02082 82 910 Receptor kinase-like Gene Family AT2G19210 44.121 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops4g02082 Malectin_like 7.8e-84 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02082 - - mtr:25500358 1137.87