Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02073 ATGATGAGAATTTTTCTACACTTTCTTTTGGTATTAGTTGGGGTCCTTACTATTGTGGTACAGGCTCAGGATCAATCAGGATTCATTAGCATAGATTGTGGCCTACCTGAAAATTCAAGTTATACTGAGAGGAACACAGGCATAAATTACATTTCAGATGCTAAATTCATAGATACTGGTGTAAGTAAGAGTATCTTGCCTGCAGACAACATGATTCGACAGGAACTACTTTATGTGAGGAGCTTTCCTAGTGGAGTGAGAAACTGTTACACAATAAATGTAAACAGTGGTACCAAATATTTAATCCGAGCTTTGTTCTATTATGGAAACTATGATGGTCTAAATAAGGCCCCACAATTTGATCTTCATCTTGGAGCTAATTTGTGGGACACAGTGAAGTTCCCCAATGCATCACTCGCCATGTTCCGTGAAATCATTTACATTCCACTGCTAGATTATATACATCCGTGTCTGGTTAACACAGGCACAGGGACTCCATTTATTTCAGTTATAGAATTGAGGACTTTGAATAATTATGCTTATAACACTCAATCAGAGTCATTGAAACTCTTCCGACGATTTGATGTAGGTTCCATCTCCAACTTAGAATACAGGTACAGTGATGATGTTTATGACCGCTTTTGGATGCCTCTTGGATTGAAAGATTGGAAACAATTAAGCACCTCACTTAGCCCTGATGATCTATCTCAGAATAAATTTAGTCCACCAACAATTGTCATGAGCACTGCTGTTACACCAGTAAATGCCAATGCTCCTTTAGAGTTCTCTTGGGAACCGGTTAATGCAAATGACCAATTCTACATCTACATGCACTTTAATGAGGTTGAAAAGCTAGCAGCAAATGAAACCAGAGCATTCAATATTATCATAAATGGCAAGCATTGGAATGGACCTTTGGTACCTGCATACCAGCAGACAAATACCATATTTAGCACATCAGCTTTGGTTGAAGCCACAAGCTATCAATTTTCACTTTTACAGACAGAAAATTCTACCCTTCCACCCATCCTCAATGCCTTTGAGATTTATATAGTAAAAGATTTCTCACAATCAGAAACAAAACCAGATGATGTTGATGCTATCAAAAACATCAAGAACACTTATGGAGTGGCTAGAAATTGGCAAGGAGATCCGTGTGCCCCAGTAGCTTACATGTGGGAAGGCCTAAATTGTACTTTTGATGGCGATAAGCCCCCAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGATCGGGCAGATAGCATTTTCCATCTCCAAGCTTACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTGAGTGGTGTCGTACCTGATTTTCTGACACAAATGCAGTCACTTAATGTCTTAAACTTGGGGAAAAATAACTTTACAGGTTTAGTTCCCAGTGGACTCGTTGACAGATCCAAAGAAGGTTCACTATCATTGAGCTTGGAGCAAAATCCAAATTTATGTGAATCTGCTTCATGCGACCAACAGACAGATGATCAGAAGAAGAAAAACAATATAGTTATTCCTGTAGTAGCATCAGTTGGTGGGATTTTGGTGCTCCTAGTAATTGCAGCAGCAGCTTTCATCTGTGGCCTTAAGAAAAGAAAACCACAAGCTGGGAACATTCATGTGGAGCCCAATACTCCAAATGGGTCACAATTGGAATCCAAACAAAGACAATATACATATAATGATCTTGCTAAGATCACCAACAACTTTAATAGAATTCTTGGTCGAGGTGGATTTGGAACAGTTTATCATGGCTTTATTGAAGACACTGAAGTAGCTGTCAAGATGCTTTCTCCATCATCGGTACAAGGATATCAACAATTTTTAGCAGAGGTTAAACTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATTGGGTATTGCAATGAAGAAACCAGTATAGGGCTTATCTATGAATATATGGCAAATGGAAACCTGGATGAACATCTTTCAGTAAAAAGTAGCAGGGCAAAGCTTTTGACTTGGGAAGACAGACTCCAAATAGCAGTGGATGCAGCCCAAGGACTGGAATATCTGCACAATGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAAAGTACAAACATTTTATTGAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGCCTATCCAAAACTTTTCCCACTGATGGTGGCACTCATACTCATTTGTCCACTGTTGTTGCTGGAACTCCTGGTTACCTTGATCCTGAATACAGCAAATCAAACAGGTTGACAGAGAAAAGTGATGTTTACAGCTTTGGAGTAGTTCTTTTGGAGATAATCACAAGTCAACCAGCTATTACAAAAACGCCTGAGAAGATCCACATAAGTGAGTGGGTTGGCTCCATGCTTTCTAATGGAGATATAAAAAACATTGTTGACTCAAGATTACATGAAGAATATGACACTAGCTCTGTCTGGAAAGCTGTTGAAGTAGGAATGGCTTCTGTGTCCACTAATGCTGCCAGAAGACCAAACATGAGTGATGTAGTGACCGAGCTAAAGGTGTGTTTGGCTACAGAATTTGCTCGAAAAAATGCCGGTAGTCATGACATTGAAAGCGATTCAGTAGGGTTGCTCACCTTGAATGTGACTACTGAACTCAGTCCCCAAGCTAGGTAG 2664 0.3934 MMRIFLHFLLVLVGVLTIVVQAQDQSGFISIDCGLPENSSYTERNTGINYISDAKFIDTGVSKSILPADNMIRQELLYVRSFPSGVRNCYTINVNSGTKYLIRALFYYGNYDGLNKAPQFDLHLGANLWDTVKFPNASLAMFREIIYIPLLDYIHPCLVNTGTGTPFISVIELRTLNNYAYNTQSESLKLFRRFDVGSISNLEYRYSDDVYDRFWMPLGLKDWKQLSTSLSPDDLSQNKFSPPTIVMSTAVTPVNANAPLEFSWEPVNANDQFYIYMHFNEVEKLAANETRAFNIIINGKHWNGPLVPAYQQTNTIFSTSALVEATSYQFSLLQTENSTLPPILNAFEIYIVKDFSQSETKPDDVDAIKNIKNTYGVARNWQGDPCAPVAYMWEGLNCTFDGDKPPRITSLNLSSSGLIGQIAFSISKLTMLQYLDLSNNSLSGVVPDFLTQMQSLNVLNLGKNNFTGLVPSGLVDRSKEGSLSLSLEQNPNLCESASCDQQTDDQKKKNNIVIPVVASVGGILVLLVIAAAAFICGLKKRKPQAGNIHVEPNTPNGSQLESKQRQYTYNDLAKITNNFNRILGRGGFGTVYHGFIEDTEVAVKMLSPSSVQGYQQFLAEVKLLMRVHHKNLTSLIGYCNEETSIGLIYEYMANGNLDEHLSVKSSRAKLLTWEDRLQIAVDAAQGLEYLHNGCKPPIIHRDVKSTNILLNENFQAKLADFGLSKTFPTDGGTHTHLSTVVAGTPGYLDPEYSKSNRLTEKSDVYSFGVVLLEIITSQPAITKTPEKIHISEWVGSMLSNGDIKNIVDSRLHEEYDTSSVWKAVEVGMASVSTNAARRPNMSDVVTELKVCLATEFARKNAGSHDIESDSVGLLTLNVTTELSPQAR* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02073 887 Gene3D Ribonuclease Inhibitor 365 493 IPR032675 -
Rops4g02073 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Rops4g02073 887 Pfam Protein tyrosine and serine/threonine kinase 579 847 IPR001245 GO:0004672|GO:0006468
Rops4g02073 887 Pfam Malectin-like domain 31 351 IPR024788 -
Rops4g02073 887 FunFam Leucine-rich repeat receptor-like protein kinase 556 651 - -
Rops4g02073 887 SUPERFAMILY Protein kinase-like (PK-like) 558 848 IPR011009 -
Rops4g02073 887 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Rops4g02073 887 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 861 - -
Rops4g02073 887 Gene3D Transferase(Phosphotransferase) domain 1 652 870 - -
Rops4g02073 887 Pfam Leucine rich repeat 432 476 IPR001611 GO:0005515
Rops4g02073 887 CDD STKc_IRAK 583 849 - -
Rops4g02073 887 PANTHER OS07G0107800 PROTEIN-RELATED 29 852 - -
Rops4g02073 887 SMART serkin_6 577 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02073 887 SUPERFAMILY L domain-like 366 475 - -
Rops4g02073 887 ProSiteProfiles Protein kinase domain profile. 577 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02073 887 Gene3D Phosphorylase Kinase; domain 1 564 651 - -
Rops4g02073 887 FunFam Leucine-rich repeat receptor-like kinase 363 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02073 Rops-Chr4 47047332 47052164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02073 8 887 Receptor kinase-like Gene Family AT1G51800 50.055 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops4g02073 Malectin_like 9.4e-115 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02073 - - gmx:100779474 1266.52