Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02071 ATGATGAGAATTCTTTTGGTATTGCTTGGGGTCCTTACTATTGTGGTACAAGCTCAGGGTCAACCAGGATTCATTAGCATAGATTGTGGCCTACCTGAAAATTCAAGCTACACTGAGAAGAACACAGGAATAAATTACATTTCAGATGCTAAATTCATAGATACCGGTGTAACTAAGAGTATATCGCCTGCAGAGAAGATTACCCGACAGGAACTAAGTTATGTGAGGAGCTTTCCTAGTGGAGTGAGAAACTGTTACAGAATAAATGTAACCAGTGGTCTTAAATATTTAATCCGAGCTTCTTTCTTTTATGGAAACTATGATGGTCTGAATAAGCCTCCACAATTTGATCTTCATCTTGGAGTTAATTTCTGGGTCACAGTGAAGTTCCCCACTGCATCACTCACCATGTTCAGTGAGATCATTTACACTCCAACACTAGATTATATACATCCGTGTCTGGTTAACACAGACACAGGGACTCCATTTATTTCAGTTATAGAATTGAGGACTTTGAATAATTATGCTTACAACACTCAATCAGGGTCATTGAAACTCTTCCGACGATTGGATGTAGGTTCCATCTCCAACTTAGGATACAGGTACAGTGATGATGTTTATGACCGCTTTTGGATGCCTCTTGGATTGAAAGATTGGAGACAATTAAGCACCTCACTTAGCCCTGATGATCTATCTCAGAATCAATTTAGTCCACCAACAATTGTCATGAGCACTGCTGTTACACCAGTAAATGCCAATGCTCCTTTAGAGTTCTCTTGGGAACCGGTTAATGCAAATGACCAATTCTACATCTACATGCACTTTAATGAGGTTGAAAAGCTCGCAGCAAATGAAACTAGAGAATTCAATATTATCATAAATGGCAAGCATTGGAATGGACCTCTGGTACCTGCATACCAGCGGACAAATACCATATTTAGCACATCAGCTTTGGCTGAAGCCACAAGCTATCAATTTTCACTTTTACAGACAGAAAATTCTACCCTTCCACCCATCCTCAATGCCTTTGAGATTTATGTAGTAAAAGATTTCTCACAAACAGAAACAAAACAAGATGATATTGATGCTATCATAAACATCAAGAACACTTATGGAGTGTCTAGAAATTGGCAAGGAGATCCGTGTGCCCCTGTAGCTTACACGTGGGAAGGCCTAAATTGTACTTTTGATGGCGATAAGCCCCCAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGATCGGGCAGATAGCATTTTCCATCTCCAAGCTTACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTAAGCGGTCCCATACCTGATTTTCTGACACAAATGCAGTCACTGAATGTCTTAAACTTGGGGAAAAATAACTTTACAGGTTTAGTTCCCAGTGGACTCGTTGACAGATCCAAAGAAAGTTCACTATCATTGAGCGTGGAGCAAAATCCAAATCTATGTGAATCTGCTTCATGCAACCACCAGATAGATGATCAGAAGAAGAAGAAAAACAATATAATTATTCCCATAGTAGCATCAGTTGCTGGGATTTTGGTGCTCCTAGTAATTGCAGCAGCAGCTATTATCTGTGGGCTGAAAAAAAGAAAACCAAGAACAGCTGTAAACATTCAAGTAGAGCCCAATACTCCAAATGTGTCACAATTGGAAGCCAAACAAAGACAATATACATACAGTGATCTTGCTAAGATCACCAACAACTTTGATAGAATTCTTGGTAGAGGTGGATTTGGAACAGTTTATCATGGCTTTATTGACGACACTCAAGTAGCTGTCAAGATGCTTTCTCCATCATCAGTACAAGGATATCAACAATATTTAGCAGAGGTTAAACTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATTGGGTATTGCAATGAAGAAACCAATATAGGGCTCATCTACGAATATATGGCAAATGGAAACCTGGATGAACATCTTTCAGTAAAAAGTAGCAGGGCAAAGTTTTTGACTTGGGAAGACAGACTCCAAATAGCAGTGGATGCAGCCCAAGGACTAGAATATCTGCACAAGGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAAAGTACAAACATTTTATTGAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGCCTATCCAAAGCTTTTCCCACTGATGGTAGCACTCATACTCATTTGTCCACTGTTGTTGCTGGAACTCCTGGTTACCTTGATCCTGAATACAGCACATCAAACAGGTTGACAGAGAAAAGTGATGTTTACAGCTTTGGAGTAGTTCTTTTGGAGATAATCACAAGTCAACCAGCTATAACAAAAACGCCTGAGAAGATTCACATAAGTGAGTGGGTTGGCTCCATGCTTTCTAATGGAGATATAAAAAACATTGTTGACTCAAAATTACAAGAAGATTATGACACTAGCTCTGTCTGGAAAGCTGTTGAAATAGGAATGGCTTCTGTGTCCACTAATCCTGCTAGAAGACCAAACATGAGTGATGTAGTGACCGAGCTAAAGGTGTGTTTGGCTACGGAATTAGCTCGAAAAAGTACTGGTCGTCATGACATTGAAAGTGATTCAGTAGGGTTGCTCACCTTGAATGTGACTACTGAACTCAGTCCCCAAGCTAGGTAG 2658 0.3954 MMRILLVLLGVLTIVVQAQGQPGFISIDCGLPENSSYTEKNTGINYISDAKFIDTGVTKSISPAEKITRQELSYVRSFPSGVRNCYRINVTSGLKYLIRASFFYGNYDGLNKPPQFDLHLGVNFWVTVKFPTASLTMFSEIIYTPTLDYIHPCLVNTDTGTPFISVIELRTLNNYAYNTQSGSLKLFRRLDVGSISNLGYRYSDDVYDRFWMPLGLKDWRQLSTSLSPDDLSQNQFSPPTIVMSTAVTPVNANAPLEFSWEPVNANDQFYIYMHFNEVEKLAANETREFNIIINGKHWNGPLVPAYQRTNTIFSTSALAEATSYQFSLLQTENSTLPPILNAFEIYVVKDFSQTETKQDDIDAIINIKNTYGVSRNWQGDPCAPVAYTWEGLNCTFDGDKPPRITSLNLSSSGLIGQIAFSISKLTMLQYLDLSNNSLSGPIPDFLTQMQSLNVLNLGKNNFTGLVPSGLVDRSKESSLSLSVEQNPNLCESASCNHQIDDQKKKKNNIIIPIVASVAGILVLLVIAAAAIICGLKKRKPRTAVNIQVEPNTPNVSQLEAKQRQYTYSDLAKITNNFDRILGRGGFGTVYHGFIDDTQVAVKMLSPSSVQGYQQYLAEVKLLMRVHHKNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSVKSSRAKFLTWEDRLQIAVDAAQGLEYLHKGCKPPIIHRDVKSTNILLNENFQAKLADFGLSKAFPTDGSTHTHLSTVVAGTPGYLDPEYSTSNRLTEKSDVYSFGVVLLEIITSQPAITKTPEKIHISEWVGSMLSNGDIKNIVDSKLQEDYDTSSVWKAVEIGMASVSTNPARRPNMSDVVTELKVCLATELARKSTGRHDIESDSVGLLTLNVTTELSPQAR* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02071 885 PANTHER OS07G0107800 PROTEIN-RELATED 25 850 - -
Rops4g02071 885 CDD STKc_IRAK 581 847 - -
Rops4g02071 885 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Rops4g02071 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Rops4g02071 885 FunFam Leucine-rich repeat receptor-like protein kinase 553 649 - -
Rops4g02071 885 Pfam Malectin-like domain 27 347 IPR024788 -
Rops4g02071 885 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 859 - -
Rops4g02071 885 SUPERFAMILY Protein kinase-like (PK-like) 555 846 IPR011009 -
Rops4g02071 885 Gene3D Phosphorylase Kinase; domain 1 562 649 - -
Rops4g02071 885 ProSiteProfiles Protein kinase domain profile. 575 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02071 885 Gene3D Transferase(Phosphotransferase) domain 1 650 868 - -
Rops4g02071 885 FunFam Leucine-rich repeat receptor-like kinase 359 492 - -
Rops4g02071 885 Pfam Protein tyrosine and serine/threonine kinase 577 846 IPR001245 GO:0004672|GO:0006468
Rops4g02071 885 SUPERFAMILY L domain-like 371 475 - -
Rops4g02071 885 Gene3D Ribonuclease Inhibitor 362 489 IPR032675 -
Rops4g02071 885 SMART serkin_6 575 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02071 Rops-Chr4 47024706 47029516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02071 4 885 Receptor kinase-like Gene Family AT1G51800 50.388 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops4g02071 Malectin_like 1.3e-114 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02071 - - gmx:100779474 1248.03