Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02070 ATGATGGGAATGTTTCTGCATTTTCTTTTGGTATTGCTTGGGGTCCTTACTATTGTGGTACAAGCTCAGGAGGATCAATCAGGTTTCATCAGCATAGATTGTGGCCTACCTGAAAAATCAAGCTATACTGAGAAGAACACAGGCATAAATTACATTTCAGATGCTAAATTCATAGATACTGGTGTAAGTGAGAGTATATCGCCAGCAGAGAAGATTACTCATCAAATGCAACTAAGTTATGTGAGGAGCTTTCCCAGTGGAGTGAGAAACTGTTACAGAATAAATGTAACCAGTGGTACTAAATATCTAATCCGAGCTTCATTCTACTATGGAAACTATGATGGTCTAAATAAGGCCCCACAGTTTGATCTTCATCTTGGAGCTAACTTTTGGGATACAGTGAAGTTCCCAAATGTATCACTCACCACAATCAGTGAGATCATTTACACTCCACCACTAGATTATATACATCCATGTCTTGTTAACACAGGCAAAGGGACTCCATTTATTTCAGCTATAGAATTGAGGACTTTGAAAATTGATGTTTATAACACTCAACCGGCTGCATCATTGGCACGCCTCAGACGATTTGATGTAGGCTCCATCACCAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGAGTGTGGACACCTCTTGGATTCAAACAATGGACATCATTAAGCAATTCTCTTAGCCCTGATGATCTAGCTCAAAATGAATATAAACCACCAGCAGCTGTCATGAGCACTGCTGCTACACCAGCAAATGCCAGTGCTCCTTTGGAGTTCTCTTGGGAACCAGATCATGTAAATGACCAACTTTACATCTACATGCACTTCAATGAGGTTAAAATGCTCCCAGTCAATGAAACTAGAGCATTCAATATTATCATAAATGGTGAGCAATGGTATGATGGACCTCAGACGACAAGTACCATATTTAGCCGATCAGCTGTGACTGGAGCCGCAAGCTATCAATTTTCACTTTTACCAACAGAGACTTCTACCCTTCCACCGATCCTCAATGCCTTGGAGATTTATATAGTAAAAGATTTCTCACAGTCAGAAACTGAACAAGATGATGTTGATGCAATCACAAACATCAAGAATGCTTATGAGGTGACTAGAAATTGGCAAGGAGATCCATGTGCTCCTGTAGCATACATGTGGAAAGGCCTAAACTGCAGTTTTGATGGCAATAACACCCCAAGAATCTCATCCTTGGATTTGTCTTCAAGTGGACTGACCGGGAAAATAGCATCTTCAATCTCCAAGCTCACAATGTTACAGTACTTGGATTTATCCAACAATAGCTTAAGCGGTCCCGTACCTGATTTTCTGACACAACTGGAGTCACTAAAAGTCTTAAACTTGGGGAATAACAACTTTACTGGTTTAGTTCCCAGTGGACTCGTTGACAGATCCAAAAAAGGTTTACTGTCATTGAGCGTGGAGCAAAATCCAAATCTATGTGAATCTGCTTCATGCAACCACCATATAGATGATCAGAAGAAGAAGAAAAACAATATAATTATTCCCATAGTAGCATCAGTTGCTGGGATTTTGGTGCTCCTAGTAATTGCAGCAGCAGCTATTATCTGTGGGCTGAAAAAAAGAAAACCAAGAGCTGTAAACATTCAAGTGGAGCCCAATACTCCAAATGTGTCACAATTGGAAGCCAAACAAAGACAATATACATACAGTGATCTTGCTAAGATCACCAACAACTTTGATAGAATTCTTGGTAGAGGTGGATTTGGAACAGTTTATCATGGCTTTATTGACGACACTCAAGTAGCTGTCAAGATGCTTTCTCCATCATCAGTACAAGGATATCAACAATATTTAGCAGAGGTTAAACTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATTGGGTATTGCAACGAAGAAACCAATATAGGGCTCATCTATGAATATATGGCAAATGGAAACCTGGATGAACATCTTTCAGCAAAAAATAGCAGGGCAAAGTTCTTGACTTGGGAAGACAGACTCCGAATAGCAGTGGATGCAGCCCAAGGATTGGAATATCTGCACAATGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAAAGTACAAACATTTTATTAAATGGAAACTTCCAAGCAAAATTGGCTGATTTTGGCCTATCCAAAACTTTTCCCACTGATGGTGGCACTCATACTCATTTGTCTACTGTTGTTGCTGGAACTCCCGGTTACCTTGATCCTGAATACAGCTTATTAAACAGATTGACAGAGAAAAGTGATGTTTACAGCTTCGGAGTAGTTCTTTTGGAGATAATCACAAGTCAACCAGCTATAACAAAAACACCTGAGAAGATTCACATAAGTGAGTGGGTTGGCTCCATGCTTTCTAATGGAGATATAAAGAATATTGTTGATTCAAGATTACAGGAAGATTATGACACTAGCTCTGTCTGGAAAGCTGTTGAAACAGGAATGGCTTCTGTGTCCACTAATCCTGCAAGAAGGCCAAACATGAGTGATGTAGTGACTGAGCTAAAGGTGTGTTTGGCTACAGAATTAGCTAGAAAAAATACTGGTCGTGACATTGAAAACGATTCAATAGAGTTGGTCACCTTGAATCTGACTACTGAGCTCAGTCCCTTAGCTAGGTAG 2661 0.398 MMGMFLHFLLVLLGVLTIVVQAQEDQSGFISIDCGLPEKSSYTEKNTGINYISDAKFIDTGVSESISPAEKITHQMQLSYVRSFPSGVRNCYRINVTSGTKYLIRASFYYGNYDGLNKAPQFDLHLGANFWDTVKFPNVSLTTISEIIYTPPLDYIHPCLVNTGKGTPFISAIELRTLKIDVYNTQPAASLARLRRFDVGSITNLEYRYKDDVYDRVWTPLGFKQWTSLSNSLSPDDLAQNEYKPPAAVMSTAATPANASAPLEFSWEPDHVNDQLYIYMHFNEVKMLPVNETRAFNIIINGEQWYDGPQTTSTIFSRSAVTGAASYQFSLLPTETSTLPPILNALEIYIVKDFSQSETEQDDVDAITNIKNAYEVTRNWQGDPCAPVAYMWKGLNCSFDGNNTPRISSLDLSSSGLTGKIASSISKLTMLQYLDLSNNSLSGPVPDFLTQLESLKVLNLGNNNFTGLVPSGLVDRSKKGLLSLSVEQNPNLCESASCNHHIDDQKKKKNNIIIPIVASVAGILVLLVIAAAAIICGLKKRKPRAVNIQVEPNTPNVSQLEAKQRQYTYSDLAKITNNFDRILGRGGFGTVYHGFIDDTQVAVKMLSPSSVQGYQQYLAEVKLLMRVHHKNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSAKNSRAKFLTWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKSTNILLNGNFQAKLADFGLSKTFPTDGGTHTHLSTVVAGTPGYLDPEYSLLNRLTEKSDVYSFGVVLLEIITSQPAITKTPEKIHISEWVGSMLSNGDIKNIVDSRLQEDYDTSSVWKAVETGMASVSTNPARRPNMSDVVTELKVCLATELARKNTGRDIENDSIELVTLNLTTELSPLAR* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02070 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Rops4g02070 886 FunFam Leucine-rich repeat receptor-like protein kinase 555 651 - -
Rops4g02070 886 Pfam Leucine rich repeat 405 465 IPR001611 GO:0005515
Rops4g02070 886 SUPERFAMILY Protein kinase-like (PK-like) 557 848 IPR011009 -
Rops4g02070 886 Gene3D Transferase(Phosphotransferase) domain 1 652 872 - -
Rops4g02070 886 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 861 - -
Rops4g02070 886 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Rops4g02070 886 PANTHER OS07G0107800 PROTEIN-RELATED 30 852 - -
Rops4g02070 886 ProSiteProfiles Protein kinase domain profile. 577 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02070 886 SUPERFAMILY L domain-like 372 490 - -
Rops4g02070 886 CDD STKc_IRAK 583 849 - -
Rops4g02070 886 SMART serkin_6 577 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02070 886 FunFam Leucine-rich repeat receptor-like kinase 362 495 - -
Rops4g02070 886 Gene3D Ribonuclease Inhibitor 364 487 IPR032675 -
Rops4g02070 886 Gene3D Phosphorylase Kinase; domain 1 564 651 - -
Rops4g02070 886 Pfam Protein tyrosine and serine/threonine kinase 579 848 IPR001245 GO:0004672|GO:0006468
Rops4g02070 886 Pfam Malectin-like domain 32 350 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02070 Rops-Chr4 47010047 47016196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02070 8 886 Receptor kinase-like Gene Family AT1G51800 50.277 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops4g02070 Malectin_like 1.7e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02070 - - gmx:100779474 1266.91