Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02027 ATGAGGATCAATGGAACCACAAAAGCTCCAGTCATGAATTTTACAGCTGAGACTTCACTGAGAGTGGTTACTGTAAGAGCATTCAACATGGTAGACAAATTTTTCAAAAACTACTTAAAACTTGTGGACACAGATGCAACACTGTTCTTTCATTCTAATGTGGCCTTGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGTCAGTCTTCACTGCAACTTTGTTACTTATTGTACTTCCTAAGGGATACATGCCCTCAGGTCTTGTGGGACTGTCTCTTTCTTATGCTTTCTCCTTGACAAGGGCCCAAATATTTTGGACTCGATGCTTTTGCAACTTATCGAATCATATTATCTCAGTTGAAAGAATCAAGCAATTAATTCACATACCTGCAGAGCCTCCTTCCATTGTGGAGGATAAGAGGCCTCCATCTTCATGGCCTCTCAAGGGTAGGATTGATCTTCAAGCACTAGAGATTAGATATCGTCCAAATGCTCCATTAGTCCTTAAGGGTATCACTTGTACGTTTAAAGAAGGGAGTAGAGTTGGAGTTGTAGGAAGGATTGGAAGTGGAAAAATGAGTGATGAAGTTGGAAATTGGAGCTTGGGACAATGCCAACTATTTTGTCTTGGAAGAGTACTACTTAAGAGGAAAATGATTCTTGTTTTAGATGAAGCTACTGCCTCCATTGACACTGCAACAGATGTTATTCTACAAGAAGTAATTAGACAAGAATTTGCAGAATGCACAATTATAACTGTAGCTCACAGAGTTCCAACTGTCATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGCAACTAGTGGAATATGATGAGCCTTCAAAACTTTTAGGGACCAACTCTTCATTCTCTAAGCTGGTTGCTGAATATTGGTCCAGTTGCAGGAAGAATTCCCCTCATAATATCAGCATGCAGTGA 948 0.3966 MRINGTTKAPVMNFTAETSLRVVTVRAFNMVDKFFKNYLKLVDTDATLFFHSNVALEWLVLRIEALQNLSVFTATLLLIVLPKGYMPSGLVGLSLSYAFSLTRAQIFWTRCFCNLSNHIISVERIKQLIHIPAEPPSIVEDKRPPSSWPLKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRIGSGKMSDEVGNWSLGQCQLFCLGRVLLKRKMILVLDEATASIDTATDVILQEVIRQEFAECTIITVAHRVPTVIDSDMVMVLSYGQLVEYDEPSKLLGTNSSFSKLVAEYWSSCRKNSPHNISMQ* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02027 315 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 196 - -
Rops4g02027 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 292 IPR027417 -
Rops4g02027 315 Gene3D - 137 195 IPR027417 -
Rops4g02027 315 Gene3D ABC transporter type 1, transmembrane domain 1 135 IPR036640 GO:0005524|GO:0016020
Rops4g02027 315 SUPERFAMILY ABC transporter transmembrane region 4 136 IPR036640 GO:0005524|GO:0016020
Rops4g02027 315 Gene3D - 196 302 IPR027417 -
Rops4g02027 315 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 299 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02027 Rops-Chr4 46432303 46434202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02027 203 297 Calmodulin-binding Proteins AT2G36910 34.021 2.92e-11 62.8