Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02017 ATGCACAATTCCCCAAAAGGATGTGGACACAGCACTCTGCACACTGGCAGAGTTCCCACAACATGCATGAATAGGCTTAGACTTATGCTCAAATCTAAACACAGAAATCAGCTTCCATTAGGCACTCTTGGATGGCCTTTTATTGGGGAAACCATTGAGTTTGTTTCTTGTGCTTACACTGATCGCCCTGAGAGCTTCATGGACAAGAGACGCAGCATGTATGGCAAGGTGTTCAAGTCACACATATTTGGAAGCCCCACAATTGTTTCTACAGATGCAGATGTGAATAGATTTATACTGCAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAGTCTCTCATGGAGTTGATGGGGGAGTCTTCTATTTTGGTCCTCAATGGAAGCCTACAAAGGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGGAGAAGTATGTCCAAGAATCAATGGCAAATTGGAGGGAGGACTACCCCATATACATACAAGATGAAGCAAAAAAGATTGCCTTTTATGTACTAGTCAAGGCATTGATTAGTTTGGATCCAGGTGAAGAAATGGAGCTTCTAAAGAAACATTTTCAGGAATTTATCTCTGGTCTCATGTCTTTACCCATAAACCTACCAGGAACTAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGTGAAATTAGTGAGGAGAACAATCCAAGCTAGAAGAAATAATGGCATGTCCAAAGTTCCAAAAGATGTAGTGGATGTACTTCTTAATGATGCAAGTGAGAAATTAACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCCGTTCTTATGACTCTAGCTACAAAGTTCCTATCAGAATCTCCTGCTGCTTTGCAACAATTGACGGAGGAAAATATGAAGCTTAAGAAACTCAAAGATCAGCTTGGAGAGCCCTTATGTTGGAACGATTACTTATCGTTGCCATTTACTCAAACAGTCATCACAGAAACTCTGAGAATGGGAAATATTATAATTGGAGTTATGAGAAAGGCTATAAAAGATGTTGAAATAAAAGGGTATTTAATACCAAAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAACTATGAGCAGTCATATCAATTCAATCCATGGAGGTGGCAAGATAAAGACACCAGTAGTTGCTATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGCCCAGGCCTTGACTTGGCCAGGCTAGAAGCTTCCATCTTCTTACACCACTTTGTAACTCAATTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCCACTGTGAGAATGAAAAAGAGGATGCCTATCTTTGTAAGGAGAGTGGAACCTTGA 1428 0.3978 MHNSPKGCGHSTLHTGRVPTTCMNRLRLMLKSKHRNQLPLGTLGWPFIGETIEFVSCAYTDRPESFMDKRRSMYGKVFKSHIFGSPTIVSTDADVNRFILQSDAKVFVPSYPKSLMELMGESSILVLNGSLQRRIHGLIGAFFKSQQLKAQITRDMEKYVQESMANWREDYPIYIQDEAKKIAFYVLVKALISLDPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRRTIQARRNNGMSKVPKDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKFLSESPAALQQLTEENMKLKKLKDQLGEPLCWNDYLSLPFTQTVITETLRMGNIIIGVMRKAIKDVEIKGYLIPKGWCVFANFRSVHLDEKNYEQSYQFNPWRWQDKDTSSCYFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWYAEEDTIVNFPTVRMKKRMPIFVRRVEP* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02017 475 SUPERFAMILY Cytochrome P450 33 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 PANTHER CYTOCHROME P450 26 35 448 - -
Rops4g02017 475 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 29 473 - -
Rops4g02017 475 Gene3D Cytochrome P450 29 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 CDD CYP90-like 70 472 - -
Rops4g02017 475 Pfam Cytochrome P450 39 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g02017 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02017 Rops-Chr4 46304089 46311156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02017 34 446 Cytochrome P450 AT3G13730 69.139 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02017 K12638 - gmx:100797868 815.068