Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02009 ATGAGCTTTGTGGGTGGGTTAGATATGTGTGATGGAAGATATGACACGGAACAACATTCATTGTTTCAAACTCTCATTAGGGAATCTCATTGTTATGACTTTTACCAAACAAACATTGAAGGAGCTAGTCTTAACAAAGGAGGGCCAAGAGTGCCTTGGCATGATGCTCATGCTTGTGTTATTGGTGAGGCAGCTTGGGATGTGTTAACTAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTCTTCTAGTCCCTACTAGCACCTTGGTAAATCTTATGCCTAAGACAAGCTCAAGTACTACCAAAGAGAGGAATTGA 324 0.4074 MSFVGGLDMCDGRYDTEQHSLFQTLIRESHCYDFYQTNIEGASLNKGGPRVPWHDAHACVIGEAAWDVLTNFEQRWTKQCDPSLLVPTSTLVNLMPKTSSSTTKERN* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02009 107 Gene3D Endonuclease Chain A 1 106 - -
Rops4g02009 107 PANTHER PHOSPHOLIPASE D 2 101 IPR015679 -
Rops4g02009 107 SUPERFAMILY Phospholipase D/nuclease 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02009 Rops-Chr4 46191961 46192284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02009 1 106 Phospholipase D Gene Family (Wang group) AT1G55180 62.264 6.10e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02009 K01115 - gmx:100812642 212.231