Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02005 ATGCCTAAGACAAGCTCAAGTACTACCAAAGAGAGGAATTGGAAAGTTCAAGTATTTAGGTCAATTGACCATGTCTCAATTGGTGACTTGTTTGGTAAGTTAAGTGTGGAAAGGAGCATCCATGAAGCTTATGTTGAAGCAATTAGGCGTGCTGAAAGTAAGATCAAAGCAAAGGAAAGGTTTGCAGTGTACATAGTCATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACATCTTCAAGATATACTACATTGGACAAGAGAAACAAATACAATGATGTATAAGTTGATTGGAGAAGCAATACAAGAAAGTGGAGAACCAGGGCACCCAAGAGACTACTTGAATTTTTTATGCCTTGCAAATAGGGAGCAGAAGGGAAAAGAAGAGTATCTTCCACTAGATTCTCCTCATCCTGAAACACAATACTGGAATGCTTAA 441 0.3923 MPKTSSSTTKERNWKVQVFRSIDHVSIGDLFGKLSVERSIHEAYVEAIRRAESKIKAKERFAVYIVIPMWPEGVPESEHLQDILHWTRETNTMMYKLIGEAIQESGEPGHPRDYLNFLCLANREQKGKEEYLPLDSPHPETQYWNA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02005 146 PANTHER PHOSPHOLIPASE D 53 129 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02005 Rops-Chr4 46146358 46146911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02005 4 146 Phospholipase D Gene Family (Wang group) AT1G55180 47.826 1.84e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02005 K01115 - gmx:100812642 244.973