Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02001 ATGGGAATGCAACTGATTTTGCTGCTAATTAAGCTACATTTAGTGGTCTGTACTCAACAGGTTCATCAATATGCAGCCACCAATCTGCATAATTTCAGAGCCAGAAGTCTTTTTAGTATTGCATTCCCACCATCAAAGACATCTTCTGAAGTTCCTTCAAGTATTGTACATCCTGCAAGTATTGCACTTCCACCTTCTAAGTCAACTACAAAGAAATGGACGCATGGTTCTGTGGATTCTCCAATATCACATCATAAGCATCACTATTCCAGAAGAAATAATCACAATCCAACTCCAGGGCCAACCTACCCAGTCCAGGCTCCAACCTACCCAGTCCAGGCTCCTACTTACAGCCATCAAGGTCCTTCAGTCTTCAGATCACAACCTCCTTTCTCTTCACCAAAGAGCAAGGATATCCATGCACCTGCACCTGCACCATCACCAATATTTCTGCCAGGCCATTTGGATGTGCCCTCTCCTTCACCTAGAATTTCACCTCTAGGTTCATCATTAAAGAAGATCAAGACTCCACCACCAGCATACACATTGGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGTCCATGACATGCTCAGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCCGCATCAACATTGCAATATACAAGATTTTTCCTCTGGTTTCAGGGCTAGCTGATGAAATCGCAGCAAGTGTTTTGCTGAACCATAGCCAAGTTCGCATTGTGGGAGCAGATGCAGCTAATCAGCAACTAGAGAAAACCACTGTTCTCATAAACTTGGTACCCAAGGGAGTAAAATTTGATGATACCACAGCATTTTTAATATATAAGAAATTCTGGCACAGGGAGATTCTAATAGATGCTTCACTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAACTCCCTCGGGTGTTTCTAGCATAGATGATGGACCAAATCCAGGTCATGACAACAATGGAGCAATAATGAAACCTTTAGGAGTAGATGTCTCACAGAAGAAAAAAGAAGGGAGCAATGGAAGAATGATTTTTATAATTGTGCTGTCATCGATTACGGCTTTTGTTCTATTCATTGGACTTGCTTGGCTTTGTCTGTTGAAATGCAGTTCTTGTGTTCATGAACATGAACAAGTTCCAGATGGTTTAATTTCATCCTCTTCGAAACAATCAAGGGCGGCTAGGTCATTAACTCATGGGACTATGCCAGGTTCTGGATCACGGTACTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTAACTTAAATGACATGGAGAAAGCAACAAATAACTTTGATCCTTCAAGAATATTGGGAGAAGGTGGATTTGGACTTGTTTATAAAGGTATTCTAAATGATGGGAGGGATGTAGCAGTGAAGATTCTCAAAAGAGATGATCAGCGTGGTGGTCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGCTTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAGACTCGTTGCCTAGTCTATGAGCTTGTTCCCAATGGAAGTGTGGAATCCCATTTACATGGTGCTGACAAGGAAACTGATTCACTGGATTGGAATGCCCGGATGAGGATCGCACTTGGTGCAGCTCGTGGATTGGCTTATCTTCATGAAGATTCAAATCCATGTGTCATACATAGGGACTTTAAGTCCAGCAACATCTTGTTGGAATATGATTTTACACCTAAGGTTTCAGATTTTGGATTGGCTAGAACAGCATTGGACGAGGGAAACAAGCACATCTCCACTCATGTCATGGGAACATTTGGCTACTTAGCTCCTGAATATGCCATGACTGGCCATCTTCTTGTCAAAAGTGATGTTTACAGTTATGGAGTTGTGCTCCTTGAGCTCCTAACTGGTAGAAAGCCAGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACTTGGGTCCGTCCACTTCTCACAAGTAAGGAGGGTTTACAGATGATCATAGACCCAGTTGTAAAGCCCCACATATCTGATGATACTGTGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTGTCTCAACGTGCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAATTAGTATGCAGTGAGTTTGAGGAAACAAACTATGCGAGATCAAGGAGTTGTCAAGAAAAGGGTCTTCTAACTAATGTGGAAGGGAAGTTTTCTGGAGTTTCAGGTGAGAGTGTGGATTTTTTAGACTATCAAAGAACCTTGTCTGGCTATCAATCTGGTGAAGAAAAGATAGCATTATCAGCATCAGAGCTTCACAGTACTTCAGGCCAGGAATTTGAGTTGTCTAGGAGGCATTCTACTTCAGGGCCTTTGACTATGGAGAAGAAAATGCATTTCTGGCAAAAATTAAGAAGTTTGTCTAGAGGTAGCACCAGTGAACATGGATTTCCAACCAAACTATGGTTTGGATCCCATTAA 2556 0.4202 MGMQLILLLIKLHLVVCTQQVHQYAATNLHNFRARSLFSIAFPPSKTSSEVPSSIVHPASIALPPSKSTTKKWTHGSVDSPISHHKHHYSRRNNHNPTPGPTYPVQAPTYPVQAPTYSHQGPSVFRSQPPFSSPKSKDIHAPAPAPSPIFLPGHLDVPSPSPRISPLGSSLKKIKTPPPAYTLVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLRINIAIYKIFPLVSGLADEIAASVLLNHSQVRIVGADAANQQLEKTTVLINLVPKGVKFDDTTAFLIYKKFWHREILIDASLFGAYEVLYVHYPGLPPSPPSTPSGVSSIDDGPNPGHDNNGAIMKPLGVDVSQKKKEGSNGRMIFIIVLSSITAFVLFIGLAWLCLLKCSSCVHEHEQVPDGLISSSSKQSRAARSLTHGTMPGSGSRYFNSGTITYTGSAKIFNLNDMEKATNNFDPSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGADKETDSLDWNARMRIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPHISDDTVVKVAAIASMCVQPEVSQRAFMGEVVQALKLVCSEFEETNYARSRSCQEKGLLTNVEGKFSGVSGESVDFLDYQRTLSGYQSGEEKIALSASELHSTSGQEFELSRRHSTSGPLTMEKKMHFWQKLRSLSRGSTSEHGFPTKLWFGSH* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02001 851 MobiDBLite consensus disorder prediction 59 143 - -
Rops4g02001 851 FunFam Receptor-like serine/threonine-protein kinase ALE2 535 751 - -
Rops4g02001 851 MobiDBLite consensus disorder prediction 109 134 - -
Rops4g02001 851 Pfam Protein tyrosine and serine/threonine kinase 463 732 IPR001245 GO:0004672|GO:0006468
Rops4g02001 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Rops4g02001 851 Gene3D Phosphorylase Kinase; domain 1 434 534 - -
Rops4g02001 851 MobiDBLite consensus disorder prediction 63 77 - -
Rops4g02001 851 SUPERFAMILY Protein kinase-like (PK-like) 438 732 IPR011009 -
Rops4g02001 851 Gene3D Transferase(Phosphotransferase) domain 1 535 755 - -
Rops4g02001 851 ProSiteProfiles Protein kinase domain profile. 459 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g02001 851 CDD STKc_IRAK 465 733 - -
Rops4g02001 851 FunFam receptor-like serine/threonine-protein kinase ALE2 432 534 - -
Rops4g02001 851 ProSitePatterns Protein kinases ATP-binding region signature. 465 487 IPR017441 GO:0005524
Rops4g02001 851 MobiDBLite consensus disorder prediction 323 345 - -
Rops4g02001 851 PANTHER OS01G0750732 PROTEIN 186 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02001 Rops-Chr4 46096634 46102173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02001 191 846 Receptor kinase-like Gene Family AT5G56890 58.982 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops4g02001 PK_Tyr_Ser-Thr 5.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02001 - - gmx:100814040 1394.41