Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02000 ATGACTTGTTCCTCTCTAGCTCCTCTCAAGAAATATGAGGTTTTTATCAGCTTTAGAGGCGAGGACGCTCGTGCCAGCTTCACTAGTCATCTTCATGCTGCTTTGTGCAGAAGCCATGTGGAGACCTATATGGACTATACAGAATCGAGAAAGGAGATGAGCTTGAATGCCTTTAACAATGCATATCCTAAAACGGAATATGATGAGGTATCAATCAAAGCAATTGCTTATGCCAAAGGCGTCCCTTTAGCTTTGAAAGTTTTGGGATCACTTCTTCGTTCCAAAAATATTGGGATAAGAAACCTTTTAGACAAGGCTCTTATAACTACTACTTCATATGATTGCATAGGAATGCATGACTTGATACAAGAAATGGGTAGGGAAATTGTTAGTGAAGAATCTCCTAAAGATCCTGGACAACACAACAGATTGTGGAAACCTGAGGAAGTCTCTGATGATGGATATCCATTAAAGGCTCTATCATCAACTTTTCACCCTGGGAAGCTTGTTGAGCTTTCCCTGCCATACAGCAATGTGGAAAAACTTTGGAGTGGAGTACAGAATCTGTCGAGTTTAGAGAGAATCGACCTTAGTGAGTCCCCACACTTGCTAGAGTGTCCAAATTTGTCCGCCGCTTTTAGCTATGGCGCCGCCTTGCATATGGCGGCCGCCATGCCCCGTCATACTATTTCCGCCAGGCAACAGTGGCTGTATGGCATTTTTTCAGATTTCCGCCAGGCCATGGCCGCTATTTAA 756 0.4365 MTCSSLAPLKKYEVFISFRGEDARASFTSHLHAALCRSHVETYMDYTESRKEMSLNAFNNAYPKTEYDEVSIKAIAYAKGVPLALKVLGSLLRSKNIGIRNLLDKALITTTSYDCIGMHDLIQEMGREIVSEESPKDPGQHNRLWKPEEVSDDGYPLKALSSTFHPGKLVELSLPYSNVEKLWSGVQNLSSLERIDLSESPHLLECPNLSAAFSYGAALHMAAAMPRHTISARQQWLYGIFSDFRQAMAAI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02000 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 107 IPR027417 -
Rops4g02000 251 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 97 212 IPR044974 GO:0006952
Rops4g02000 251 PRINTS Disease resistance protein signature 78 92 - -
Rops4g02000 251 PRINTS Disease resistance protein signature 187 203 - -
Rops4g02000 251 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 51 IPR035897 -
Rops4g02000 251 SUPERFAMILY L domain-like 118 208 - -
Rops4g02000 251 Gene3D - 7 72 IPR035897 -
Rops4g02000 251 Pfam Leucine Rich Repeat 168 187 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02000 Rops-Chr4 46070016 46076000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02000 155 212 WRKY Transcription Factor Family AT4G12020 40.909 1.07e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02000 - - adu:107465359 136.732