Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01998 ATGATGAAGCCTTTTTTTGTTGCTCTGAGGCCTCATCTCCCATCATGCATAAATGCTCTATATCTTCATGGAATTGAAGAGATCCCATTTGATTATGAGAAGGAAGGCAATGAAGATGAATATGGTCAAGAGGAGGATGTGGAGGAACATGTTGAAGAGGAGGTTGTGGAGGAATATGTTGTAGAGGAAAATGATGAAGGTGTTGATGAGGATGGATTGAGCTATAAGGATGGTCCAATTGATGGCGAAGGTACGATGATAAGTGTTGATATTGTTGACGATATTGGTAATTTGGACCTAGTTAACTTGGGTGCACATCAAGTAGTGAATATTGATTTCGGTATTCTTGAGGTGGTGTTGTTATTGTACTGTCTATATGCAAGAGTGAAATTATTAACTGATAGGAAATCGAAGATACACAGGAGTAAAAATGGTGAGATTGTCCAACAAGCATATGTTTGCAATAGACAGGGATACAAGAAGGACAAAGAATTGAGTGCTGAACAACATCAGAGGAAGGCAAGACTGCAAACTAGATGTGGGTGTGAAGCTCAATTTAAGGTTCATATAGATAAAAAATCTATGCGGTGGCATGTTACTTATTTCAATGATGAACACAATCATCGAATGTTGGATGCGAAGTATGTGGGGATGTTGCTAGCGTTTAGGAAGATGGGCGAGTCAGATATAATGGAGATGAATTACTTTAGGAATGCTGGCATACCACCATATCTCATGTATGGATCATTTGCACGCCAATGTTCGAAGCCTTCACCTCCCTAA 783 0.3946 MMKPFFVALRPHLPSCINALYLHGIEEIPFDYEKEGNEDEYGQEEDVEEHVEEEVVEEYVVEENDEGVDEDGLSYKDGPIDGEGTMISVDIVDDIGNLDLVNLGAHQVVNIDFGILEVVLLLYCLYARVKLLTDRKSKIHRSKNGEIVQQAYVCNRQGYKKDKELSAEQHQRKARLQTRCGCEAQFKVHIDKKSMRWHVTYFNDEHNHRMLDAKYVGMLLAFRKMGESDIMEMNYFRNAGIPPYLMYGSFARQCSKPSPP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01998 260 Pfam FAR1 DNA-binding domain 123 210 IPR004330 -
Rops4g01998 260 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01998 Rops-Chr4 46018222 46019778 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops4g01998 FAR1 2.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01998 - - mtr:112420123 149.828