Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01994 ATGTATAGATCCAAGCCCCAAAGCATTCAAAAAGATGTCGAATCTAAGGATACTTTCTTTCCAGGGTCACAATGGGACTATAAGAGAATTAATTCTATGAACCTGCCTATGGGTCTTGAATTATTGTCCAAGAACTTGAGGTATTTTGGGTGGGCGTCATATCCATTAAAGTCTCTGCCATCAACTTTTGGTGTAGAGAAGCTTGTTGAGCTTTTCCTACCAGACAGCAATGTGGAAAAACTTTGGAGCGGAGTACGGAATCTGCCGAGTTTAGAGAGAATTGACCTTAGTTGGTCCACACGCTTGATAGAGTGTCCAAATTTGTCTGGTGCCCCAAATCTTCAACATGTATCACTCATCGGATGTGAAAGCTTGCTTCAAGTTGATCCATCTATTTACACTCTCCCGAAGCTTTTAGAATTAAATGTGTTTTACTGCAAGTCGCTTAAGAGCCTCTGCAGGGGCACCTGTTCACCACATTTGCGACTACTTAGTGCCTGGGGTTGCACTAATCTCCAAGAATTGACATTAATGCCCCCCAGTACCAGTGGTCATTCTACAACTGATTTGTATTTTGAAAGGTCAGGTTTGAATAAGGAGATTCCTTCATCACCTTTGTATAAGGGAAATCTTGAATATTTTTCTTTTCCCATCCGTGAGAGTCTTATGGATCTTCCTGAAAATTTTGCCTCTGGTATCGCTCTTTCTTGCTCAACTAAAGATGGACTTGATAATTTGATCACCTTACGTAAAGTACTATCAAGCTCTTGCTTCTGGTATGTAAGACGTTTGTTTTTTATTGATTGTCTCACTTTATTTGAACTCCCAGACAACATCTCCGAGTTATTATCGTTAGAGTCTTTAGAACTATTATCTTGTGCTGTCATAAGCTTACCTGAAAGCATTAAGAATCTTCCACGACTCAGACGTCTTTCAGTCTTTAAATGTCAAATGCTTCGATCTATACTTACACTTCCACAATCCATTCAGTACTTCGAAGTTTGGGACTGCAAATCTCTTCAGAATGTGTTAACTTCAAGGAGTGAACCATCCAAAAATCCCAACGACTGTATTTTTCTGCTTCCTAACTGCATAAATTTGGATCAAAAATCATCCAATGCCATTTTGAAAGATGCCATTGGTAGGATTGAACTTGGAGGCAAACTAATGTCTGCAGAAGTATTAGAAGATGATGATGTTAAGATTTGCTACATGTTACCATCTGGAAACTGCAAAGTTGGAAACTGGTTCCATTACCACTCTACAAATGCTTCTGTCACCATTGAACTTCCCCGTAATCATTTGGGTTTCATTTTCTACATGGTTCTTCCTAAAGTTCAATCATTCTTCAGAGGATCCCTTGGAAGGTTTGGATGTGAATGCAACTTGGAAACTAGTTGGGGTGAAAGGATCAACATAAATAGTTTCTTTGAATATGTGCGTAACCTTTCTCCTTTCTATACTGTAAATGGCTTGAAGTCAGATCATGTGTTTTTATGGTATGATGCAAAATGTTACACGGAGATAATGGAAACAATCAAAGAAATAAAAGCCAATGATAGGTGCACCACTCAAAATCCAAAGCTTACATTTAATTTTTTTGCTCTAACTGAAAATGATAAGGAAGTAACGATTAAAGAGTGTGGATTTCGCTGGATATATTCCTCAGAAGATCAAATTATTGAGGAAGAAGAAGGATGTGCATCCAAGAGATGTAGGGAAAGAGTTGAGGTCTCTGAGTCTGATGAAATTCCTGCAACAAAGAAATTAAAGCAATGTGTCTTTGAAACTCCCTTCAATCTAGAAGCCCAAGAAATGGATTTGTGGTAA 1830 0.3842 MYRSKPQSIQKDVESKDTFFPGSQWDYKRINSMNLPMGLELLSKNLRYFGWASYPLKSLPSTFGVEKLVELFLPDSNVEKLWSGVRNLPSLERIDLSWSTRLIECPNLSGAPNLQHVSLIGCESLLQVDPSIYTLPKLLELNVFYCKSLKSLCRGTCSPHLRLLSAWGCTNLQELTLMPPSTSGHSTTDLYFERSGLNKEIPSSPLYKGNLEYFSFPIRESLMDLPENFASGIALSCSTKDGLDNLITLRKVLSSSCFWYVRRLFFIDCLTLFELPDNISELLSLESLELLSCAVISLPESIKNLPRLRRLSVFKCQMLRSILTLPQSIQYFEVWDCKSLQNVLTSRSEPSKNPNDCIFLLPNCINLDQKSSNAILKDAIGRIELGGKLMSAEVLEDDDVKICYMLPSGNCKVGNWFHYHSTNASVTIELPRNHLGFIFYMVLPKVQSFFRGSLGRFGCECNLETSWGERININSFFEYVRNLSPFYTVNGLKSDHVFLWYDAKCYTEIMETIKEIKANDRCTTQNPKLTFNFFALTENDKEVTIKECGFRWIYSSEDQIIEEEEGCASKRCRERVEVSESDEIPATKKLKQCVFETPFNLEAQEMDLW* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01994 609 Gene3D Ribonuclease Inhibitor 236 409 IPR032675 -
Rops4g01994 609 Pfam C-JID domain 413 557 IPR045344 -
Rops4g01994 609 SUPERFAMILY L domain-like 16 342 - -
Rops4g01994 609 Pfam Leucine Rich Repeat 67 85 IPR011713 -
Rops4g01994 609 Gene3D Ribonuclease Inhibitor 26 190 IPR032675 -
Rops4g01994 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 178 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01994 Rops-Chr4 45847281 45849256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01994 31 288 WRKY Transcription Factor Family AT4G12020 33.083 3.40e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01994 - - lja:Lj3g3v2692950.1 648.277